Transcript Information: R_Transcript_21.p1


Annotated TAIR IDAT1G75560.1
Annotated Gene Namezinc knuckle (CCHC-type) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:28371420-28372717 | Reverse length=257
E-Value4E-49
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.112242960361
Replicate 211.178585869788
Replicate 311.55941850917
Condition 2: 8 Hour
Replicate 112.923095388824
Replicate 210.869873117243
Replicate 311.260721403388
Condition 3: 24 Hour
Replicate 114.561201806461
Replicate 212.661352326072
Replicate 317.226434244317


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_21.p1 GENE.R_Transcript_21~~R_Transcript_21.p1 ORF type:complete len:216 (+),score=16.19,zf-CCHC|PF00098.19|50,zf-CCHC|PF00098.19|4.2e-05,zf-CCHC|PF00098.19|8.2e-07,zf-CCHC|PF00098.19|0.0011,zf-CCHC|PF00098.19|6.1e-05,zf-CCHC|PF00098.19|0.0004,zf-CCHC|PF00098.19|0.00063,zf-CCHC|PF00098.19|0.00017,zf-CCHC_3|PF13917.2|0.033,zf-CCHC_3|PF13917.2|0.076,zf-CCHC_3|PF13917.2|0.25,zf-CCHC_3|PF13917.2|0.17,zf-CCHC_3|PF13917.2|28,zf-CCHC_3|PF13917.2|0.0056,zf-CCHC_3|PF13917.2|0.033,zf-CCHC_4|PF14392.2|36,zf-CCHC_4|PF14392.2|0.0043,zf-CCHC_4|PF14392.2|1.9,zf-CCHC_4|PF14392.2|81,zf-CCHC_4|PF14392.2|0.014,zf-CCHC_4|PF14392.2|0.83,zf-CCHC_4|PF14392.2|0.8,zf-CCHC_2|PF13696.2|51,zf-CCHC_2|PF13696.2|0.013,zf-CCHC_2|PF13696.2|0.11,zf-CCHC_2|PF13696.2|0.54,zf-CCHC_2|PF13696.2|0.043,zf-CCHC_2|PF13696.2|12,zf-CCHC_2|PF13696.2|4.8 R_Transcript_21:141-788(+)
ATGGATGCTAACAGGGGTACAGGAGGTAGAGTATTCCGAAACAAGGAGCGGGCATCCTATGCACCATACCAAAAGGATCGTCGGAGTTTCAGGCACATGGCTGCTGACTGTAACTCGAAAACGATGTGTTGGAATTGCAAAGAACCAGGGCATCTGTCGACGGAATGCAAGAACCAGCCTATTTGTCACTCGTGTGGGAAGATGGGCCATTTAGCTCGTGAATGTCCGAAATCAAGCGATCCTAGAGTTTGCAGCAACTGTTTCCAACCAGGGCATTTGGCAGCAGACTGCATCAATGAAAAGGCATGTAACAAGTGCCGGAAGCCCGGCCACCTTGCTCGTGACTGTCTCAACGAACCCATTTGCAATATCTGCAACATTACAGGACATGTAGCCCGTCAATGTCCCAACTCCGCTCTTCCACCACCGTTTGCACCACCTCCTATGGTAGGGGGCCCACCCCCTCTTCCACCCCCAATGATTGGGGGCCCATATCCAGATATTTTCTGCCGGAGCTGTGGTCGTCCAGGTCATATAAGTCATCAGTGCATGTATATGGTCATGTGCAGCACCTGTGGTGGTCGTGGTCATCGTGCATTTGATTGCCCCTCTAGCCCGATGCTTGATATGGTCTATCGTCGGTATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_21.p1 GENE.R_Transcript_21~~R_Transcript_21.p1 ORF type:complete len:216 (+),score=16.19,zf-CCHC|PF00098.19|50,zf-CCHC|PF00098.19|4.2e-05,zf-CCHC|PF00098.19|8.2e-07,zf-CCHC|PF00098.19|0.0011,zf-CCHC|PF00098.19|6.1e-05,zf-CCHC|PF00098.19|0.0004,zf-CCHC|PF00098.19|0.00063,zf-CCHC|PF00098.19|0.00017,zf-CCHC_3|PF13917.2|0.033,zf-CCHC_3|PF13917.2|0.076,zf-CCHC_3|PF13917.2|0.25,zf-CCHC_3|PF13917.2|0.17,zf-CCHC_3|PF13917.2|28,zf-CCHC_3|PF13917.2|0.0056,zf-CCHC_3|PF13917.2|0.033,zf-CCHC_4|PF14392.2|36,zf-CCHC_4|PF14392.2|0.0043,zf-CCHC_4|PF14392.2|1.9,zf-CCHC_4|PF14392.2|81,zf-CCHC_4|PF14392.2|0.014,zf-CCHC_4|PF14392.2|0.83,zf-CCHC_4|PF14392.2|0.8,zf-CCHC_2|PF13696.2|51,zf-CCHC_2|PF13696.2|0.013,zf-CCHC_2|PF13696.2|0.11,zf-CCHC_2|PF13696.2|0.54,zf-CCHC_2|PF13696.2|0.043,zf-CCHC_2|PF13696.2|12,zf-CCHC_2|PF13696.2|4.8 R_Transcript_21:141-788(+)
MDANRGTGGRVFRNKERASYAPYQKDRRSFRHMAADCNSKTMCWNCKEPGHLSTECKNQPICHSCGKMGHLARECPKSSDPRVCSNCFQPGHLAADCINEKACNKCRKPGHLARDCLNEPICNICNITGHVARQCPNSALPPPFAPPPMVGGPPPLPPPMIGGPYPDIFCRSCGRPGHISHQCMYMVMCSTCGGRGHRAFDCPSSPMLDMVYRRY*

Click here to download the sequence:
Link to NCBI Protein BLAST