Transcript Information: R_Transcript_210035.p1


Annotated TAIR IDAT5G55690.1
Annotated Gene NameMADS-box transcription factor family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:22548790-22549623 | Reverse length=277
E-Value3E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.4950090513644
Replicate 22.416840335689
Replicate 32.4719501003042
Condition 2: 8 Hour
Replicate 12.2019662722343
Replicate 22.5739144565394
Replicate 31.9588069014806
Condition 3: 24 Hour
Replicate 11.9819689692982
Replicate 21.4280383454331
Replicate 32.5981807721856


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_210035.p1 GENE.R_Transcript_210035~~R_Transcript_210035.p1 ORF type:5prime_partial len:278 (+),score=61.30,SRF-TF|PF00319.14|1.9e-17,SRF-TF|PF00319.14|3.6e+03 R_Transcript_210035:3-836(+)
AAAACACCAGCAGCAACACAACTTCCCAAACCCAATTTTGGAAATACAAGAAATAAGATGGGTAGAAAGAAAATAGAGATGGGAAAAATAGAGAACAAGAGAACATTGATGAGGACATTCAACAACAGAAAACAAGGGCTTATGAAGAAGGCTGGTGAGCTTTCGAAGCTTTGTGATGTCGAAACTTGTGTCATAATTTTTGGACCAAATGGAGATCATGCCCCTCATGTTTGGCCTATGGAACCCCAGAAGCTTAACAACTCGATTTTGAGGTATCAGAACACCAGCATAGAGGAACGCCGCAAAAGAGCTACTAATCTCTCCACTTTCATCCACTCAACCAACATGATTAGTCCGTCCCCAAATGAACATCTTGTTAAAGTAACAATGCCCGAGAAACAGACTTGGGATCCTCGGATTGACAGTTTTTCGGTTGATCAGTTGGTGGCCTTGGTGAATTGCTTGGACTCCAAGCTTGAAATCGTCAAGGACAGAATTGGAATGATGAAGATGAGAAGTGCTTATGATCAATTTCAGGGGATTCAAGAGCATGAAGAAGAAGAAAAGATTAATGCAATGCCGATGATGAATATGACAGATGATCAAATGGGTTTGCCTAACTTGGGTTCATATGATCAATATCATCAGCAGCAGCAGCTTTCGGCAGGGTTGAATTTGATGATGGTTAATGGTGGTTACATGAACCCCATGAATGTTGATATGAGTTTACTGGGAATGGGGATTATGCAGGGGCCATCCCATCCGACTCCGGTGACTTGGTACTATGATCCTTCTCAGTTGCAAGCTTCTCAAGCAGTTCATCTCCCTTTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_210035.p1 GENE.R_Transcript_210035~~R_Transcript_210035.p1 ORF type:5prime_partial len:278 (+),score=61.30,SRF-TF|PF00319.14|1.9e-17,SRF-TF|PF00319.14|3.6e+03 R_Transcript_210035:3-836(+)
KTPAATQLPKPNFGNTRNKMGRKKIEMGKIENKRTLMRTFNNRKQGLMKKAGELSKLCDVETCVIIFGPNGDHAPHVWPMEPQKLNNSILRYQNTSIEERRKRATNLSTFIHSTNMISPSPNEHLVKVTMPEKQTWDPRIDSFSVDQLVALVNCLDSKLEIVKDRIGMMKMRSAYDQFQGIQEHEEEEKINAMPMMNMTDDQMGLPNLGSYDQYHQQQQLSAGLNLMMVNGGYMNPMNVDMSLLGMGIMQGPSHPTPVTWYYDPSQLQASQAVHLPF*

Click here to download the sequence:
Link to NCBI Protein BLAST