Transcript Information: R_Transcript_210592.p1


Annotated TAIR IDAT3G53190.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:19714171-19717537 | Forward length=483
E-Value1.5E-248
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.309244677447
Replicate 27.1457997215132
Replicate 38.662211696024
Condition 2: 8 Hour
Replicate 16.0185844513187
Replicate 25.6371971028199
Replicate 37.3597917011233
Condition 3: 24 Hour
Replicate 111.527134301305
Replicate 27.6915398652013
Replicate 314.990318756152


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_210592.p1 GENE.R_Transcript_210592~~R_Transcript_210592.p1 ORF type:complete len:476 (+),score=49.10,Pec_lyase_C|PF00544.15|3e-21 R_Transcript_210592:586-2013(+)
ATGCTCCAAAGGACCTGCATTGTCCAGATTTTGGTTTTTTGCTTTGTTTTTTCACTCTCCACTGCGTTTGTCAACCTTACTCTTCCTGGTCAACACCCTGACCCAGATGCCGTTGCTTGGGACGTCCACAGCAAGGTGAACGTTTCAATAACCAGAAGACGCCTTCTACAAGCTGATCAGGAGAACCAAATCTCAGATTGCCTCACCGGTAATCCCGTAGACGATTGCTGGCGGTGTGACCCGGAATGGTACAAAGACCGGCAAAGGCTGGCCGATTGTGGCATTGGGTTTGGGCAGTATGCTCTTGGTGGCAAAGGCGGACAATTTTACGTAGTTACTGACTCTTCCGATCATGACGCTGTTAATCCACGTCCTGGCACTCTTCGTTATGCTGTCATTCAAACTGAACCCCTTTGGATCGTCTTCTCCTCCAACATGGTTATCCATCTTTCACAGGAACTAATTTTCAATAGTTACAAAACAGTAGATGGTCGAGGAGCCAATATTCACATAACCGGAGGGGGCTGCATAACCTTACAATACATAAGTAACGTAATAATCCACAACATCCACATCCACCATTGTTACAGTTCAGGCAACACCATGGTCCGGTCCAGCCCAACCCATTATGGATATCGAACCAAGTCAGATGGTGATGGGATTTCCATATTTGGGGCTAAGGACCTTTGGATTGATCACTGTTCTTTGTCACATTGTAATGATGGGCTTATTGACATGGTTATGGGCTCAACTGCAATTACTGTGTCCAACAGCCACTTCTCCCACCATAACGAGGTCATGTTATTGGGCCACAGTGACTCATATGAGCCTGATTCTGGCATGCAAGTCACCATTGCTTTCAACCATTTTGGGCCTAAGTTAATCCAGAGGATGCCAAGATGCAGGAAAGGGTATGTGCATGTTGTTAACAATGACTTTACTCAATGGGAGATGTATGCTATTGGAGGCAGTGGGAATCCTACCATTAATAGCCAAGGCAATCGCTACATTGCTCCTTTTGACCGTAACGCCAAAGAGGTGACAAAGAGGGTGGACTCAGACGAGAAGGACTGGAGGGGATGGAACTGGAGATCAGATGGGGACATAATGGTAAATGGAGCATATTTTGTGGCATCAGGTGAAGGAGTTGAAGTCAGATATGAGAAGGCATCAAGTGTGGAGCCCAAATCTGCTGCTTACATCGACCAACTCGTCATGAACGCCGGTGTTTTCGGCGAAAGGAGAAATAATATGGGCCGATGGACCGAAGGACCAGGAGCGAAAAATGACTTGAATGATTATGATTATGGTGATGATTATGGTGGAAGTACACCATCAGTCTCTTCTCAAGCTTCCTTCATTCTTTTCTTGCTAGCTTTATCATTTCTATTTTTGTACATCACCCCTAACATCAATCTTCTATGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_210592.p1 GENE.R_Transcript_210592~~R_Transcript_210592.p1 ORF type:complete len:476 (+),score=49.10,Pec_lyase_C|PF00544.15|3e-21 R_Transcript_210592:586-2013(+)
MLQRTCIVQILVFCFVFSLSTAFVNLTLPGQHPDPDAVAWDVHSKVNVSITRRRLLQADQENQISDCLTGNPVDDCWRCDPEWYKDRQRLADCGIGFGQYALGGKGGQFYVVTDSSDHDAVNPRPGTLRYAVIQTEPLWIVFSSNMVIHLSQELIFNSYKTVDGRGANIHITGGGCITLQYISNVIIHNIHIHHCYSSGNTMVRSSPTHYGYRTKSDGDGISIFGAKDLWIDHCSLSHCNDGLIDMVMGSTAITVSNSHFSHHNEVMLLGHSDSYEPDSGMQVTIAFNHFGPKLIQRMPRCRKGYVHVVNNDFTQWEMYAIGGSGNPTINSQGNRYIAPFDRNAKEVTKRVDSDEKDWRGWNWRSDGDIMVNGAYFVASGEGVEVRYEKASSVEPKSAAYIDQLVMNAGVFGERRNNMGRWTEGPGAKNDLNDYDYGDDYGGSTPSVSSQASFILFLLALSFLFLYITPNINLLC*

Click here to download the sequence:
Link to NCBI Protein BLAST