Transcript Information: R_Transcript_210650.p1


Annotated TAIR IDAT4G01990.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:871268-872885 | Reverse length=502
E-Value1E-80
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.3373288590256
Replicate 25.6128723885153
Replicate 37.2122203520559
Condition 2: 8 Hour
Replicate 18.1457926953212
Replicate 210.051327085048
Replicate 39.6329339529974
Condition 3: 24 Hour
Replicate 19.0012788734365
Replicate 28.6910822162869
Replicate 38.4516879484059


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_210650.p1 GENE.R_Transcript_210650~~R_Transcript_210650.p1 ORF type:complete len:505 (+),score=81.01,PPR|PF01535.16|1.2e+04,PPR|PF01535.16|4e-05,PPR|PF01535.16|0.0041,PPR|PF01535.16|0.051,PPR|PF01535.16|6e+02,PPR|PF01535.16|1.1e+04,PPR|PF01535.16|3.5,PPR|PF01535.16|0.11,PPR|PF01535.16|4.6e+02,PPR_3|PF13812.2|4.2e+03,PPR_3|PF13812.2|0.039,PPR_3|PF13812.2|0.00063,PPR_3|PF13812.2|0.0038,PPR_3|PF13812.2|1e+02,PPR_3|PF13812.2|93,PPR_3|PF13812.2|1.4e+02,PPR_3|PF13812.2|1.2e+02,PPR_3|PF13812.2|6.4e+03,PPR_2|PF13041.2|1.4e+02,PPR_2|PF13041.2|0.0036,PPR_2|PF13041.2|1.5e-07,PPR_2|PF13041.2|0.31,PPR_2|PF13041.2|7.3e+02,PPR_2|PF13041.2|0.00013,PPR_2|PF13041.2|3.1e+02,PPR_1|PF12854.3|0.0018,PPR_1|PF12854.3|1.2,PPR_1|PF12854.3|3.2e+03,PPR_1|PF12854.3|6.8e+03 R_Transcript_210650:254-1768(+)
ATGGGGGTCAGACCGGGCCATACGATGTTATCTCGATTTGGGATAATGTTGTGGAGACAGATGTGCACAATGACATCGACAGTAACGGTAAAAAGAGAGAAAGAGGGGACAGTGCTGTTTCGGAGATTGACAGCACTGGGGTTTAGAAACACTAAGATCAAAGTCGCTGATGTACTCGATAAGTGGCAGAAAGAAGGGCATTCTCTTTCCAGACCTCAACTACTCTCATATGTCACCGAACTTCGCCGCTACAAGATGCCCCACATTGCCATCCAGCTATATCAATGGATGGAGGAAAAGAAGAGGACTATGAAAAATTCTGACCGTGCTATTTTCATAGATCTCCTCGCGAAAACCAAGGGGATCACATCAGCAGAAGAGCACTTTAACAGCCTTGCACAATCCGCACAAACGAAAAAAACTTATGGTGCACTGCTTAAGTGTTACTGCAGTGGGCAGATGGTGGAGAAGGCCACTGAGCTCTTTCAGAAGATGACAGAGTTGAATTTCCATGGTGCTGCCTTAAACTATAACAATATGATGGCTCTTTACATGAAGGTTGGCATGCCTGAAAGAGTGCCGTTGCTGGTTCAAGAAATGGAGGAGAAAAACATTGCACCAGACTTGTATTCATATAACCAGCTGATGAACAGCTATGCAGCTCTTCAGGATATTGAGGCTGTCGAAGGAGTTTTGAGGACAATGAAAAGCAAGAAGGTTAAATATGACTGGCTCACATTGGGAAATCTTGCCACGATGTACTTTAATGCGGGGTTCAAGGACAAGGCAAATGATGCTCTAAAGGAGCTGGAGAAAATGCAAAGTCCTAAAGATCCTGAAGCCATGGATACTCTCTTAAATTTGTATTCACGTATGTCCAATGCAGCTGGAGTTATTCGGGCCTGGGAACATTGCAAGTCAAAAATTCCGAAACCCAGCAATACCACCTATCTGTTAATGCACTTGGCCTTGTCAAGGCTTGGCGACTTTGATGGTCTTGAAAAGCTATTTAGAGAGTGGGAATCAGTCTGTTCTTACTATGATGTCAGGATTTGCAATGTTCTGTTAGAATCTTATCTTAAGAGGGATATGATTGAAGAAGCCAGCTTACTTTATGACAGCATAATTGGAAGGGGTGTTAACCCCAATTTGAGAACACACGATGCCTACATGAATATATGCTTGAGGAAGCGCCAGATTGATTTTGCTTTGCAGTGTTTTGAGGCCGTTGCATCAAAGATGACGCCTGAACAAAATAACTGGTTTCCGCCTCAGGAGTCTGTTAATGCATTTCTTAAGTATTTTGAAGAGGAAAAGGATGCTAATGCGGAGAGTAAATTCCACATGATCATGAAGAAGATTAATAGCTGTGATGTCGAAACCGAGAAGATACCGAGTGTAGAAACCAAGATGATACCGAGTGTCTCTGATGTGGAAACCAAGAAAATACCAATTGTATCAAGCCCTTCTCTATTTAACAAGCTGGTCACTCAGTTCCATTCGTCCAGACTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_210650.p1 GENE.R_Transcript_210650~~R_Transcript_210650.p1 ORF type:complete len:505 (+),score=81.01,PPR|PF01535.16|1.2e+04,PPR|PF01535.16|4e-05,PPR|PF01535.16|0.0041,PPR|PF01535.16|0.051,PPR|PF01535.16|6e+02,PPR|PF01535.16|1.1e+04,PPR|PF01535.16|3.5,PPR|PF01535.16|0.11,PPR|PF01535.16|4.6e+02,PPR_3|PF13812.2|4.2e+03,PPR_3|PF13812.2|0.039,PPR_3|PF13812.2|0.00063,PPR_3|PF13812.2|0.0038,PPR_3|PF13812.2|1e+02,PPR_3|PF13812.2|93,PPR_3|PF13812.2|1.4e+02,PPR_3|PF13812.2|1.2e+02,PPR_3|PF13812.2|6.4e+03,PPR_2|PF13041.2|1.4e+02,PPR_2|PF13041.2|0.0036,PPR_2|PF13041.2|1.5e-07,PPR_2|PF13041.2|0.31,PPR_2|PF13041.2|7.3e+02,PPR_2|PF13041.2|0.00013,PPR_2|PF13041.2|3.1e+02,PPR_1|PF12854.3|0.0018,PPR_1|PF12854.3|1.2,PPR_1|PF12854.3|3.2e+03,PPR_1|PF12854.3|6.8e+03 R_Transcript_210650:254-1768(+)
MGVRPGHTMLSRFGIMLWRQMCTMTSTVTVKREKEGTVLFRRLTALGFRNTKIKVADVLDKWQKEGHSLSRPQLLSYVTELRRYKMPHIAIQLYQWMEEKKRTMKNSDRAIFIDLLAKTKGITSAEEHFNSLAQSAQTKKTYGALLKCYCSGQMVEKATELFQKMTELNFHGAALNYNNMMALYMKVGMPERVPLLVQEMEEKNIAPDLYSYNQLMNSYAALQDIEAVEGVLRTMKSKKVKYDWLTLGNLATMYFNAGFKDKANDALKELEKMQSPKDPEAMDTLLNLYSRMSNAAGVIRAWEHCKSKIPKPSNTTYLLMHLALSRLGDFDGLEKLFREWESVCSYYDVRICNVLLESYLKRDMIEEASLLYDSIIGRGVNPNLRTHDAYMNICLRKRQIDFALQCFEAVASKMTPEQNNWFPPQESVNAFLKYFEEEKDANAESKFHMIMKKINSCDVETEKIPSVETKMIPSVSDVETKKIPIVSSPSLFNKLVTQFHSSRL*

Click here to download the sequence:
Link to NCBI Protein BLAST