Transcript Information: R_Transcript_210677.p1


Annotated TAIR IDAT3G27750.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: Vacuolar sorting protein 9 (VPS9) domain (TAIR:AT5G09320.1); Has 106 Blast hits to 106 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 102; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:10284820-10285488 | Forward length=222
E-Value3E-63
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.0231016580815
Replicate 26.1035757024122
Replicate 36.2150063245375
Condition 2: 8 Hour
Replicate 15.9791065568854
Replicate 26.5002563491818
Replicate 35.6284063939184
Condition 3: 24 Hour
Replicate 18.5424398986806
Replicate 26.4114124681911
Replicate 39.9258195673139


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_210677.p1 GENE.R_Transcript_210677~~R_Transcript_210677.p1 ORF type:5prime_partial len:258 (+),score=25.63 R_Transcript_210677:3-776(+)
TCCCATTTCTCTCACACACAGTCTCAGACCCTCTCATCGATGGCCTCACAGCTGAGCTCAGCCTTCACAGCCCCACCCCTCTCTCTCTCCTCCCCATCCCCAACCCAAAAACTCCCTTCAACCACCACCACCTCATCCCACGTCACAATCCGGTGTGGGCCAAGAGACAACCGTAGCCCACTAGTAAAGGGCCGTATCCTAAGCACGGAAGCAATCCAAGCCGTCCAAGCCCTAAAGCGGTCCCACAAATCCAACGACCCAAACAACCTCACCATCACCAAAACCCTCTCTCGTCTCATAAAAGCCGACCTCCTGGCTACTCTACGGGAGCTCCTACGACAAGGCCACTGTGACCTCGCCCTCCAAGTTTTCTCCACCGTCCGATCTGAGCCCTGGTACACCCACCCTGATCTATCCCTCTACGCCGACTTAACCTTGGCTTTGGATACCAATAACATGAGGGACGATATTGACCGTCTGATTGAGGAGCTTGAGATGGAAGATGGCGTCATTGATTGGAACGATAAGAAGGGGTTGAGTAGATTGATCAGAGCGTTGATTGGGGCGCAAAGGAGGGAATCAACGGTCAGGATTTATCGGGTTATGAAGAAGTGTGGGTGGGGGTGTAGTGGATCAGGGGTTGAAGTGGATGAGTATGTGGCTAAGGTGTTGAGTAAAGGACTCAAGAAGTCGGGGGAAGGTGAGTTAGCTAAGGAAGTTGATTTGGCTCTTGAGGCTTATCTCAAGGCTTGTTTGGGGAGAGTTGGGGTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_210677.p1 GENE.R_Transcript_210677~~R_Transcript_210677.p1 ORF type:5prime_partial len:258 (+),score=25.63 R_Transcript_210677:3-776(+)
SHFSHTQSQTLSSMASQLSSAFTAPPLSLSSPSPTQKLPSTTTTSSHVTIRCGPRDNRSPLVKGRILSTEAIQAVQALKRSHKSNDPNNLTITKTLSRLIKADLLATLRELLRQGHCDLALQVFSTVRSEPWYTHPDLSLYADLTLALDTNNMRDDIDRLIEELEMEDGVIDWNDKKGLSRLIRALIGAQRRESTVRIYRVMKKCGWGCSGSGVEVDEYVAKVLSKGLKKSGEGELAKEVDLALEAYLKACLGRVGV*

Click here to download the sequence:
Link to NCBI Protein BLAST