Transcript Information: R_Transcript_21072.p3


Annotated TAIR IDAT5G04320.2
Annotated Gene NameShugoshin C terminus
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:1209613-1212376 | Forward length=470
E-Value7E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.6711650177637
Replicate 24.0968391056191
Replicate 33.9109064188553
Condition 2: 8 Hour
Replicate 12.388864872902
Replicate 22.1815494479205
Replicate 33.0990554717734
Condition 3: 24 Hour
Replicate 13.3596791064933
Replicate 22.6896657183631
Replicate 34.5376948741129


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_21072.p3 GENE.R_Transcript_21072~~R_Transcript_21072.p3 ORF type:complete len:82 (+),score=22.78 R_Transcript_21072:1776-2021(+)
ATGGTTCATAGCAAAACTATAGAAGCAAATGCAATTGAGATGCAGAAACTGAGAGGTTTGATTCAGAAAATACAGCTGCAGAATTGGCAACTTGCTCAATCCAACAGCCAGATGTTAGCGGAGCTTAATGTGGGTAAAGATAGGTTGAAAGCTCTAAACCATGAGCTTGCTTGCAAGGATGCCTTGTTCAAAGCAAAGTTGGTGGAATTGGAGGAAAAAGCAAAGATGCAATGTTCAACCGATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_21072.p3 GENE.R_Transcript_21072~~R_Transcript_21072.p3 ORF type:complete len:82 (+),score=22.78 R_Transcript_21072:1776-2021(+)
MVHSKTIEANAIEMQKLRGLIQKIQLQNWQLAQSNSQMLAELNVGKDRLKALNHELACKDALFKAKLVELEEKAKMQCSTD*

Click here to download the sequence:
Link to NCBI Protein BLAST