Transcript Information: R_Transcript_21074.p1


Annotated TAIR IDAT5G04320.2
Annotated Gene NameShugoshin C terminus
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:1209613-1212376 | Forward length=470
E-Value6.1E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.425965960007
Replicate 215.35651745658
Replicate 316.75379513505
Condition 2: 8 Hour
Replicate 110.539223423895
Replicate 27.598357907199
Replicate 310.162552224359
Condition 3: 24 Hour
Replicate 125.781097436936
Replicate 221.76975392112
Replicate 327.412756355434


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_21074.p1 GENE.R_Transcript_21074~~R_Transcript_21074.p1 ORF type:complete len:309 (+),score=85.50 R_Transcript_21074:944-1870(+)
ATGATGAAGGGAGAGAAAATGGTGAAGAGATCGTCATTTGGGACTATTAGGAAGAGACTTTCTGATATCACTAACTTGAATTCTCAATACAGATCCCCTGCTAAGGACAAAGAAAATGCTCCTGCTTCTTTTGATGGCTCTTCCTCTAAAAATTACATCGAACTGCTTCGTAAGGAAAATGCTGAGATGATGAAAGCTATCCAAGAGAGAGACAAAACTATAGAAGCAAATGCAATTGAGATGCAGAAACTGAGAGGTTTGATTCAGAAAATACAGCTGCAGAATTGGCAACTTGCTCAATCCAACAGCCAGATGTTAGCGGAGCTTAATGTGGGTAAAGATAGGTTGAAAGCTCTAAACCATGAGCTTGCTTGCAAGGATGCCTTGTTCAAAGCAAAGTTGGTGGAATTGGAGGAAAAAGCAAAGATGCAATGCCCAACTGATAAAGCACAGGAAAGGGAGCCTATACCTGAGAAAGAAGCTGCAGCAGATCACCAGATGCAGACTAACAAGAATGACGAGGAGAAAGATCCCAAAAACAAAAAAAGACGTCCTGCAAGAAGCCGATCCATGGGTCCTACAACATCTCAACAAGCTGCTGACAAAGAGATGGCTGAAAGCAAAAGGCACTGTCTGAGAAGACAATCTGTCAGGCTAAAGGAACATCAGGAGTCGCAAACACAGGTTGACTTGTTCGAGATAGATGTAGCTAATTTTCCTGCCAGTCATCCTCAGCTCACGGACGAATCACTAGCTAAATCAAATTTAAACATGACTGACAAGGAGGAGGAGGGGGGCCTCGAACGACCATCAAATGCCTTGGAATCAGAAAGATCGTCGATAGGAAGGCCACTGCGTAGAGCAGCTGCAAAAAGGGGTTCATACACAGAACCTCGCCTTAATGTGAAATTGAGGAGACCAGAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_21074.p1 GENE.R_Transcript_21074~~R_Transcript_21074.p1 ORF type:complete len:309 (+),score=85.50 R_Transcript_21074:944-1870(+)
MMKGEKMVKRSSFGTIRKRLSDITNLNSQYRSPAKDKENAPASFDGSSSKNYIELLRKENAEMMKAIQERDKTIEANAIEMQKLRGLIQKIQLQNWQLAQSNSQMLAELNVGKDRLKALNHELACKDALFKAKLVELEEKAKMQCPTDKAQEREPIPEKEAAADHQMQTNKNDEEKDPKNKKRRPARSRSMGPTTSQQAADKEMAESKRHCLRRQSVRLKEHQESQTQVDLFEIDVANFPASHPQLTDESLAKSNLNMTDKEEEGGLERPSNALESERSSIGRPLRRAAAKRGSYTEPRLNVKLRRPE*

Click here to download the sequence:
Link to NCBI Protein BLAST