Transcript Information: R_Transcript_210837.p1


Annotated TAIR IDAT4G29520.1
Annotated Gene NameLOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Saposin B (InterPro:IPR008139); Has 137 Blast hits to 137 proteins in 50 species: Archae - 2; Bacteria - 0; Metazoa - 41; Fungi - 10; Plants - 36; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:14494056-14495657 | Reverse length=306
E-Value4.4E-56
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.23235079688
Replicate 29.7836164243483
Replicate 312.112986896395
Condition 2: 8 Hour
Replicate 16.2817140440577
Replicate 28.3121602655716
Replicate 312.44953398571
Condition 3: 24 Hour
Replicate 112.139992303655
Replicate 213.394816917838
Replicate 312.032507812169


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_210837.p1 GENE.R_Transcript_210837~~R_Transcript_210837.p1 ORF type:5prime_partial len:191 (+),score=33.85 R_Transcript_210837:1-573(+)
CAAAACAAACGCAAATTTTTTCCTTTCCCTCTTAACATAAACACCCACCTTTCTCAAGCACAAAGACACAGACACTCCAGTACACTTCCTCTCAAAAAACCAAAGAAAAAAAAAATGGCAAACAAGGAAAAATCATGGCTTTTAGTGGCAAATATAGCATTACTAATACTAGTTCTCTTATCTTTGGCACCAATATCAAATTGCTCAAATAACCCATCATCACCTGCTAGAAAAGAAGACATACCTTACATAAAGTGTCAAGTTTGTGAGAAACTTGCTTCTCAATTGCACTCTCTAGTCCACAATAAGGAAGCTCTGATCTCTCCTAAGAAGATCTCAGAGTACCAGATTATAGAGATTGTTGAGAATGTTTGCAATTTGAAGAAGGAAGAAGCTGATTGGATTTTGAAGATTGACATTGTTGAACAAGGAGATAAGTTGGAGCTGGTTGATCAAGATGCTGAAGGGCAATGCAACTCTGAGTGCAAGACAATAGAACGTGCATGTCAGGAGGTTAATCAAAAAATCAAATTGAAGTTCCTGAGTATTTTAAATTGTGCTTGTAGACCCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_210837.p1 GENE.R_Transcript_210837~~R_Transcript_210837.p1 ORF type:5prime_partial len:191 (+),score=33.85 R_Transcript_210837:1-573(+)
QNKRKFFPFPLNINTHLSQAQRHRHSSTLPLKKPKKKKMANKEKSWLLVANIALLILVLLSLAPISNCSNNPSSPARKEDIPYIKCQVCEKLASQLHSLVHNKEALISPKKISEYQIIEIVENVCNLKKEEADWILKIDIVEQGDKLELVDQDAEGQCNSECKTIERACQEVNQKIKLKFLSILNCACRP*

Click here to download the sequence:
Link to NCBI Protein BLAST