Transcript Information: R_Transcript_210838.p1


Annotated TAIR IDAT4G29520.1
Annotated Gene NameLOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Saposin B (InterPro:IPR008139); Has 137 Blast hits to 137 proteins in 50 species: Archae - 2; Bacteria - 0; Metazoa - 41; Fungi - 10; Plants - 36; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:14494056-14495657 | Reverse length=306
E-Value3.9E-134
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 142.380438078772
Replicate 251.04273032238
Replicate 344.167876227064
Condition 2: 8 Hour
Replicate 132.436734887012
Replicate 233.477067354189
Replicate 339.902247484471
Condition 3: 24 Hour
Replicate 153.766128995916
Replicate 256.405690840844
Replicate 344.152783592534


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_210838.p1 GENE.R_Transcript_210838~~R_Transcript_210838.p1 ORF type:complete len:348 (+),score=87.73 R_Transcript_210838:115-1044(+)
ATGGCAAACAAGGAAAAATCATGGCTTTTAGTGGCAAATATAGCATTACTAATACTAGTTCTCTTATCTTTGGCACCAATATCAAATTGCTCAAATAACCCATCATCACCTGCTAGAAAAGAAGACATACCTTACATAAAGTGTCAAGTTTGTGAGAAACTTGCTTCTCAATTGCACTCTCTAGTCCACAATAAGGAAGCTCTGATCTCTCCTAAGAAGATCTCAGAGTACCAGATTATAGAGATTGTTGAGAATGTTTGCAATTTGAAGAAGGAAGAAGCTGATTGGATTTTGAAGATTGACATTGTTGAACAAGGAGATAAGTTGGAGCTGGTTGATCAAGATGCTGAAGGGCAATGCAACTCTGAGTGCAAGACAATAGAACGTGCATGTCAGGAGGTTCTTGGGTATTCTGACACTGATGTTGCTGAATACATATATTCTCGGAAACCTCAGCTCGATGCTTTAGTAAATTATCTATGTAAGGACCTCAGTAAAGCATGCAGTAAGAAGCCGCCTCCAGTGCCAAAGGACAGGGTTCCAGGAGAAGCATTTGTTCCAAAGCCAACCAAAGAAGCTGAAATGGAAAAGATAATGCGATCCATGGAGGGTCTCCCAGGAGCACCTGGAATGAAGATGTACTCTAGGGAAGAATTGATGAACATGCAAAATTTAGGCGATGAGGATGCTGATGAAGACGATGATGAGGAGGAGGTCAAATTCCGATCAAATTTGGGAAAAGCTTTCAAGGAGAAGGCAAATAAGAAGGTTGATTGGAAAGATGAAGTCAAGAAGCACATAACAAATGCAGGGAAGACAGTAAAGAAACATGTAAATAGAGTCTCTTACCGGCTACAAAGATGGTGGAAATCAAAGAGAAATGCAAGTGTTAAAAAGAAGAAATCAACGGCCAAGAAGGCAGAACTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_210838.p1 GENE.R_Transcript_210838~~R_Transcript_210838.p1 ORF type:complete len:348 (+),score=87.73 R_Transcript_210838:115-1044(+)
MANKEKSWLLVANIALLILVLLSLAPISNCSNNPSSPARKEDIPYIKCQVCEKLASQLHSLVHNKEALISPKKISEYQIIEIVENVCNLKKEEADWILKIDIVEQGDKLELVDQDAEGQCNSECKTIERACQEVLGYSDTDVAEYIYSRKPQLDALVNYLCKDLSKACSKKPPPVPKDRVPGEAFVPKPTKEAEMEKIMRSMEGLPGAPGMKMYSREELMNMQNLGDEDADEDDDEEEVKFRSNLGKAFKEKANKKVDWKDEVKKHITNAGKTVKKHVNRVSYRLQRWWKSKRNASVKKKKSTAKKAEL*

Click here to download the sequence:
Link to NCBI Protein BLAST