Transcript Information: R_Transcript_210842.p2


Annotated TAIR IDAT4G29520.1
Annotated Gene NameLOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Saposin B (InterPro:IPR008139); Has 137 Blast hits to 137 proteins in 50 species: Archae - 2; Bacteria - 0; Metazoa - 41; Fungi - 10; Plants - 36; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:14494056-14495657 | Reverse length=306
E-Value3.3E-38
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.0281067727465
Replicate 22.5273324575174
Replicate 32.9693919106123
Condition 2: 8 Hour
Replicate 10.68016291520126
Replicate 21.6563616178656
Replicate 32.352986561902
Condition 3: 24 Hour
Replicate 11.7005783131633
Replicate 21.8379382408814
Replicate 31.6213114582887


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_210842.p2 GENE.R_Transcript_210842~~R_Transcript_210842.p2 ORF type:complete len:108 (+),score=18.11 R_Transcript_210842:742-1065(+)
ATGATGTATCTGATGCAGGTTCTTGGGTATTCTGACACTGATGTTGCTGAATACATATATTCTCGGAAACCTCAGCTCGATGCTTTAGTAAATTATCTATGTAAGGACCTCAGTAAAGCATGCAGTAAGAAGCCGCCTCCAGTGCCAAAGGACAGGGTTCCAGGAGAAGCATTTGTTCCAAAGCCAACCAAAGAAGCTGAAATGGAAAAGATAATGCGATCCATGGAGGTAAACATCCCCCCGGCCCCTGGGGAAATGTATTTAAGGTTTCCTTCTATGTTTCATAGACTTTTCATCTCAATTCAAGTACTCATATCAGTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_210842.p2 GENE.R_Transcript_210842~~R_Transcript_210842.p2 ORF type:complete len:108 (+),score=18.11 R_Transcript_210842:742-1065(+)
MMYLMQVLGYSDTDVAEYIYSRKPQLDALVNYLCKDLSKACSKKPPPVPKDRVPGEAFVPKPTKEAEMEKIMRSMEVNIPPAPGEMYLRFPSMFHRLFISIQVLISV*

Click here to download the sequence:
Link to NCBI Protein BLAST