Transcript Information: R_Transcript_210844.p1


Annotated TAIR IDAT4G29520.1
Annotated Gene NameLOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Saposin B (InterPro:IPR008139); Has 137 Blast hits to 137 proteins in 50 species: Archae - 2; Bacteria - 0; Metazoa - 41; Fungi - 10; Plants - 36; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:14494056-14495657 | Reverse length=306
E-Value1.4E-98
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.3752415771611
Replicate 24.5609940979224
Replicate 36.7776489516706
Condition 2: 8 Hour
Replicate 14.126831170884
Replicate 23.0986989817373
Replicate 34.0790136225589
Condition 3: 24 Hour
Replicate 16.9647280353709
Replicate 25.038841918821
Replicate 36.0662552315745


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_210844.p1 GENE.R_Transcript_210844~~R_Transcript_210844.p1 ORF type:5prime_partial len:267 (+),score=56.95 R_Transcript_210844:2-802(+)
AGCAATCTTTTTGCCACACAAAAACAAACGCAAATTTTTCGTTTCCCTCTCGACAGAAACACCCACCTTTCTCAAGCACAAAGACAAAGACAAAGACACTTCACTTCCTCTCAAAAACCAAAGAAAAGAAAAATGTCAAATAAGGAAAAATCATGGCTTTTAGTAGCAAATATAGCATTACCAATACTAGTTCTCTTATCTTTGGCACCAATATCAAATTGCTCAAATAACCCATCATCACCTGCTAGAAAAGAAGACATACCTTACATAAAGTGTCAAGTTTGTGAGAAACTTGCTTCTCAATTGCACTCTCTAGTCCACAATAAGGAAGCTCTGATCTCTCCTAAGAAGATCTCAGAGTACCAGATTATAGAGATTGTTGAGAATGTTTGCAATTTGAAGAAGGAAGAAGCTGATTGGATTTTGAAGATTGACATTGTTGAACAAGGAGATAAGTTGGAGCTGGTTGATCAAGATGCTGAAGGGCAATGCAACTCTGAGTGCAAGACAATAGAACGTGCATGTCAGGAGGTTCTTGGGTATTCTGACACTGATGTTGCTGAATACATATATTCTCGGAAACCTCAGCTCGATGCTTTAGTAAATTATCTATGTAAGGACCTCAGTAAAGCATGCAGTAAGAAGCCGCCTCCAGTGCCAAAGGACAGGGTTCCAGGAGAAGCATTTGTTCCAAAGCCAACCAAAGAAGCTGAAATGGAAAAGATAATGCGATCCATGGAGGTAAACATCCCCCCTCGCCCCCAGGGAAATGTAGTTAATGTTTCCTTCTATGTTTCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_210844.p1 GENE.R_Transcript_210844~~R_Transcript_210844.p1 ORF type:5prime_partial len:267 (+),score=56.95 R_Transcript_210844:2-802(+)
SNLFATQKQTQIFRFPLDRNTHLSQAQRQRQRHFTSSQKPKKRKMSNKEKSWLLVANIALPILVLLSLAPISNCSNNPSSPARKEDIPYIKCQVCEKLASQLHSLVHNKEALISPKKISEYQIIEIVENVCNLKKEEADWILKIDIVEQGDKLELVDQDAEGQCNSECKTIERACQEVLGYSDTDVAEYIYSRKPQLDALVNYLCKDLSKACSKKPPPVPKDRVPGEAFVPKPTKEAEMEKIMRSMEVNIPPRPQGNVVNVSFYVS*

Click here to download the sequence:
Link to NCBI Protein BLAST