Transcript Information: R_Transcript_211021.p1


Annotated TAIR IDAT1G77710.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Ubiquitin-like, Ufm1 (InterPro:IPR005375); Has 244 Blast hits to 244 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 149; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:29206750-29207895 | Forward length=93
E-Value3E-56
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1324.51843213179
Replicate 2436.06000759322
Replicate 3387.72667425908
Condition 2: 8 Hour
Replicate 1425.02306629481
Replicate 2449.57141385963
Replicate 3397.80687696469
Condition 3: 24 Hour
Replicate 1443.68983231647
Replicate 2469.42877343945
Replicate 3454.11227303026


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_211021.p1 GENE.R_Transcript_211021~~R_Transcript_211021.p1 ORF type:complete len:95 (+),score=14.78,Ufm1|PF03671.10|1.2e-43 R_Transcript_211021:32-316(+)
ATGGCGAGTGGAGAAGGAGGAAAGGTATCCTTCAAGATCACCCTCACCTCCGATCCCAAGCTTCCTTTCAAAGTGTTCAGTGTGCCGGAAGCAGCGCCTTTCACCGCCGTTCTCAAATTCGCTGCCGAGGAATTTAAGGTCCCTCCTCAGACCAGCGCTATCATCACCAACGATGGTGTGGGAATCAATCCTCAGCAAAGTGCAGGCAATGTCTTCCTCAAACATGGGTCTGAATTGCGCTTGATTCCCCGTGACAGAGTTGGCGCATCACCAGCATCCTATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_211021.p1 GENE.R_Transcript_211021~~R_Transcript_211021.p1 ORF type:complete len:95 (+),score=14.78,Ufm1|PF03671.10|1.2e-43 R_Transcript_211021:32-316(+)
MASGEGGKVSFKITLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGASPASY*

Click here to download the sequence:
Link to NCBI Protein BLAST