Transcript Information: R_Transcript_211114.p1


Annotated TAIR IDAT5G18730.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF3444) (TAIR:AT5G18740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:6247611-6249197 | Forward length=528
E-Value1E-31
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.36025580831682
Replicate 20.41440066611115
Replicate 30.70327703146082
Condition 2: 8 Hour
Replicate 10.10739414450546
Replicate 20.24518510790774
Replicate 30.079612327282399
Condition 3: 24 Hour
Replicate 10.80553709570892
Replicate 20.43530116231403
Replicate 30.95998704767094


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_211114.p1 GENE.R_Transcript_211114~~R_Transcript_211114.p1 ORF type:complete len:456 (+),score=75.71,DUF3444|PF11926.4|1.1e-21,DUF3444|PF11926.4|3.8e-52 R_Transcript_211114:899-2266(+)
ATGTTGATCAAGAGAACGAGGGAGTTGACTTCTCCGATATCAAGTCCATCCCTTCCTTGTGCACATTTATTCATAATGAGGAAGGTCAAGCTCCTGATAGCTATGGGTTATACACTATGGTTGACGGTATTTCGGTCAACAAGTCCTTACAAATTTCAGAAGGCACACCACACCAAAGGAATGATGAAGGTCCTTACGATTTTGATGACATCAGGAAGGCTGATGATTTTGCAGTCGGCCAAATTTGGGCTGCATATGACGGTGAAAACCTGCCTAGAAGGTAGCCCAACAAATGATGAATTTATGATTTACCCCAAAGATAATGAAGTTTGGGCAATTTACAAGGACTGGAACCCATTTGCGTGGTGTGATGATCCGAAGTCTAGAAAAGGATGTTCCCTGCAGATTGTACAGATCATATCAGGTTTCCCGAGGAAGGAGGGTTTGATTGTTGTGCCCCTAATTAAGGTTGATGGGCCTCGAAACATTTACAAGATAGATCATGAAGATATTGGAGGAAATTGTTTTGAAATCCTTGCGAGATGTATTTATAGGTTTTCTCATCGGGTGCCAGCATATCGATTGAGGGGTGGAGAGGCGGTTGGAGCTTCTTGTCACATATTTGAGCTGGATCCTTTAGCCATTGATGCTCCTTTTTCCGAAGTTTCAACCTCTACAAGTTGTCATTCTCCACTTTCATCAATGAATTCCAGCAGAAATTCACTGAAAATAGAATGGTCGGTTGAAGATTTTGCTTCAGGTCAAGTATGGGCCATTTATAGTGGCTCTGACCGAATGCCAAGACAGTATGTTGTAGTAAATAATGTGATTCCAAGTGGGGAAGTTGGCGTGACGTTTTTAGAGCCTCATCCTATCTACAGTGAAGAAATTGCTTGGGTTGAAGAGAACTTACCCCCTGGTTGTGGAACATTCCGAAAGGGTGCAAACATTGCCACTTTGCAGGTAGGTAACTTCTCCCATGTGGTGGATTGTGACCAAAGTAGCAAGAAGATCTTTCACAAAATTTATCCGAAGAAAGGTGAAATTTGGGCAATGTACAGAAATTGGAACAGCAAATGGAAGCAACAGGACTTTGAGCACTACCATTGTCGAATGGTTGAGATCTTATCTGATTTCTCTGATGATTCTGGTGTGCTTACTGCTGGCTTAGAAGAAGTTCCTGGATACAAGACGTTCTTCCAGAGGCAACTTTCTGATGATGGGTTTGTACTGAACCGAGCTGTTTCAAAATCAGAGATGCTTAGTTTCTCACATCGTGTGGAAGCATTCGCTGTTCCTGGAATCCAAACTCATGGTATCCCAGAACATTCATGGCATCTAGAGCCTGATGCTTTGCCTCCACTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_211114.p1 GENE.R_Transcript_211114~~R_Transcript_211114.p1 ORF type:complete len:456 (+),score=75.71,DUF3444|PF11926.4|1.1e-21,DUF3444|PF11926.4|3.8e-52 R_Transcript_211114:899-2266(+)
MLIKRTRELTSPISSPSLPCAHLFIMRKVKLLIAMGYTLWLTVFRSTSPYKFQKAHHTKGMMKVLTILMTSGRLMILQSAKFGLHMTVKTCLEGSPTNDEFMIYPKDNEVWAIYKDWNPFAWCDDPKSRKGCSLQIVQIISGFPRKEGLIVVPLIKVDGPRNIYKIDHEDIGGNCFEILARCIYRFSHRVPAYRLRGGEAVGASCHIFELDPLAIDAPFSEVSTSTSCHSPLSSMNSSRNSLKIEWSVEDFASGQVWAIYSGSDRMPRQYVVVNNVIPSGEVGVTFLEPHPIYSEEIAWVEENLPPGCGTFRKGANIATLQVGNFSHVVDCDQSSKKIFHKIYPKKGEIWAMYRNWNSKWKQQDFEHYHCRMVEILSDFSDDSGVLTAGLEEVPGYKTFFQRQLSDDGFVLNRAVSKSEMLSFSHRVEAFAVPGIQTHGIPEHSWHLEPDALPPL*

Click here to download the sequence:
Link to NCBI Protein BLAST