Transcript Information: R_Transcript_2114.p1


Annotated TAIR IDAT5G54910.1
Annotated Gene NameDEA(D/H)-box RNA helicase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:22298668-22301719 | Reverse length=739
E-Value5.3E-285
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.964433895158
Replicate 215.352133637723
Replicate 316.656646558493
Condition 2: 8 Hour
Replicate 115.303665592028
Replicate 216.410001996354
Replicate 317.566074793923
Condition 3: 24 Hour
Replicate 124.438956081104
Replicate 220.18767648452
Replicate 321.652353023597


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_2114.p1 GENE.R_Transcript_2114~~R_Transcript_2114.p1 ORF type:complete len:744 (+),score=175.31,DEAD|PF00270.25|1.3e-42,DEAD|PF00270.25|6.3e+02,Helicase_C|PF00271.27|5.9e+03,Helicase_C|PF00271.27|2.5e-22,Helicase_C|PF00271.27|6.4e+03,DUF4217|PF13959.2|5.2e-14,ResIII|PF04851.11|2.3e-05,ResIII|PF04851.11|2.4e+03,ResIII|PF04851.11|5.7e+03 R_Transcript_2114:516-2747(+)
ATGAGAAAACCCAAGTCATACCGGCGTAACCTGAGGAAGCAAAAGCTCCAACAAGAAGCCCAAGAAATCGAGCTCCTTAACAAATGGATTGAATTTGGAAAACCCGAAAGGAGTTCAATCCCACTATCACTTCCCCCACTTCCAAAGGAGTCTCCAGTGGGTCAACTTGATGATAATACCTTCTCAAGGTATGTTGGGGTTGAGTATTTCAAGCAAATGCCTTTATCAAAATACACCAAAGATGGGTTGAGAGCTTCTAAGTATGTTAAGATGACTGACATTCAAAGAGCTTCTTTGCCTCATTCTCTTTATGGCCGTGATATTCTTGGTGCTGCTCAAACTGGTTCTGGAAAGTCTCTTGCTTTTATTATACCTGTCTTAGAGAAGTTATATAAAGAGAGATGGGGTCCAGAGCTTGGAGTGGGTTGCATCATCATATCTCCAACAAGGGAGTTAGCCAGTCAACTTTTTGGTGTTCTGAACTCAGTTGGAAAGTACCATGGCTTTAGTATTGGTCTCCTAATTGGTGGCCGCGATGGTGTAGACACTGAGAAAGAACTTGTGACTAAAATGAATATTTTGGTCTGTACTCCTGGAAGACTGCTCCAGCACATGGATGAGACACCGAACTTTGACTGCTTTCAGATTCAGATATTAGTTCTCGATGAAGCAGATCGAATTCTTGATGCTGGGTTCAAGAAGGAAATGAAAGCAATCTTATTACAGATTAAGAAGAAGCAAACCTTACTGTTTTCAGCAACACAAACAAAATCAGTTAAGGATCTGGGCAAACTTAGTTTAAAGGACCCTGTATATGTGAGTGTTCATGAAGAGGCCACGACAGCCACTCCCAAGGGCTTACTGCAAACAGAAACTATTGTCCCTTTACACCAGAAGTTAGACCTTTTGTGGAGTTTCATAAAGTCACATCTGAATTCCAGGATTCTAGTGTTCCTTACCACCCGCAAGCAGGTGAAGTTTGTTTATGAGGCCTTCAAAAAATTGCATCCAGGTATCCCCTTGAAATGTTTACATGGAAAGATGAATCAGGAAGCAAGGTTGGGAACATATTCTGATTTCTGCACAAAACGTAGTGTTCTATTCTCGACTGATGTTTCCTCAAGAGGTCTTGATTTCGAGAAAGCAGTGGACTGGGTTGTTCAAGTGGATTGTCCACAAGATGTTGCAACTTACATCCACAGAGTTGGTCGCACTGCTCGATACAATACTGGTGGCAAAGCTGTTTTATTTTTAGAGCCATTAGAGATGAAAATGCTTGAAAAATTAAAAGAGGCGAAAATCCCAATTATGTCAAAGATGGTGAACAAAGAAAGATTGAAACCTGTCTCTCCTTTGCTAGCATCTTTGTTAGTCAAATATCCTGATATGCAACAATTGGCTCAGAAGGCCTTTGTTACATACCTCAAGGCTATTCATAAAGAGAAGGACAAGGATGTTTTTGATGTGATGAAACTTCCCCTGGATGATTTCTCAGCCTCGCTGGGTTTACCAATGACACCAATAATTCGTTCCATAAATCGCAAAACTACAGACAAAGATTCTTCAAAAGTAGATACAACTCTTGAGGTAGATGATTCTGCTGCAGAAAACTTGCTGGAGAACCAAACAACTGTCGGTGATGAATCAGATGAAGATCAATCCGACAATGATCTTCTAGGAAAAGCGAGTTCACCTAGTGCAAAGCCAGCAGTAGCTGAAATTGAGGCTGTGATGCCGGCTACCCGAGTTTTGAAGAAAAAGAAGCTAAAAATCAACATTCATAGACCTGTGGGGACAAGGGTCGTCTTTGATGAAGAGGGCAATGTTCGACCACCCCTTGCAACTATAGCAGATGTAGATGATGATAACTGTTCTTCTGGAGTAAATGTAGATAAAGTGAAAGAGCGTTATCAGAAAGTAAGGGAAATGTTAAAGCAAGAAGATAAAGTGGACAAGCTCCACGCTCGTCAACTCCACAAGGAGAAAAGAATGAAAGAGAAGGTGAAGTTGAAGAGGGGGAGGCCAGACGACGATGATGAAGAAGAGGATGTCTCTGAGTCAGATGGAGAAGCCGCCGCTGGCAAACCCAACAAGAAGTCAAAAGTGTACTTTGACAGTGACAATGATGTCGAACGTGAAGACAAGGAAAAAGTAGACATCAATACAAACAATATTTCTCTGGCTGAGCAAGAAGCTTTGGCTCTCAAGTTGCTCGGCTCGATGCACTCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_2114.p1 GENE.R_Transcript_2114~~R_Transcript_2114.p1 ORF type:complete len:744 (+),score=175.31,DEAD|PF00270.25|1.3e-42,DEAD|PF00270.25|6.3e+02,Helicase_C|PF00271.27|5.9e+03,Helicase_C|PF00271.27|2.5e-22,Helicase_C|PF00271.27|6.4e+03,DUF4217|PF13959.2|5.2e-14,ResIII|PF04851.11|2.3e-05,ResIII|PF04851.11|2.4e+03,ResIII|PF04851.11|5.7e+03 R_Transcript_2114:516-2747(+)
MRKPKSYRRNLRKQKLQQEAQEIELLNKWIEFGKPERSSIPLSLPPLPKESPVGQLDDNTFSRYVGVEYFKQMPLSKYTKDGLRASKYVKMTDIQRASLPHSLYGRDILGAAQTGSGKSLAFIIPVLEKLYKERWGPELGVGCIIISPTRELASQLFGVLNSVGKYHGFSIGLLIGGRDGVDTEKELVTKMNILVCTPGRLLQHMDETPNFDCFQIQILVLDEADRILDAGFKKEMKAILLQIKKKQTLLFSATQTKSVKDLGKLSLKDPVYVSVHEEATTATPKGLLQTETIVPLHQKLDLLWSFIKSHLNSRILVFLTTRKQVKFVYEAFKKLHPGIPLKCLHGKMNQEARLGTYSDFCTKRSVLFSTDVSSRGLDFEKAVDWVVQVDCPQDVATYIHRVGRTARYNTGGKAVLFLEPLEMKMLEKLKEAKIPIMSKMVNKERLKPVSPLLASLLVKYPDMQQLAQKAFVTYLKAIHKEKDKDVFDVMKLPLDDFSASLGLPMTPIIRSINRKTTDKDSSKVDTTLEVDDSAAENLLENQTTVGDESDEDQSDNDLLGKASSPSAKPAVAEIEAVMPATRVLKKKKLKINIHRPVGTRVVFDEEGNVRPPLATIADVDDDNCSSGVNVDKVKERYQKVREMLKQEDKVDKLHARQLHKEKRMKEKVKLKRGRPDDDDEEEDVSESDGEAAAGKPNKKSKVYFDSDNDVEREDKEKVDINTNNISLAEQEALALKLLGSMHS*

Click here to download the sequence:
Link to NCBI Protein BLAST