Transcript Information: R_Transcript_211478.p1


Annotated TAIR IDAT1G44180.1
Annotated Gene NamePeptidase M20/M25/M40 family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:16808239-16810413 | Reverse length=435
E-Value4.8E-82
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.2547775297005
Replicate 20.98806119606109
Replicate 32.6949103054297
Condition 2: 8 Hour
Replicate 11.4403449968968
Replicate 21.1838113915922
Replicate 32.3490319626383
Condition 3: 24 Hour
Replicate 13.2411021968523
Replicate 21.6865786210442
Replicate 32.9612776929332


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_211478.p1 GENE.R_Transcript_211478~~R_Transcript_211478.p1 ORF type:5prime_partial len:170 (-),score=15.73,Peptidase_M20|PF01546.24|2.9e-07 R_Transcript_211478:19-528(-)
GGGGCCCAGGATGACAAGTGTATCGGCGTCCAGTACCTCGAGGCTATCAAGAACCTTCGAGAACTTCAAGATTTCAAGCCCATCAGGACAGTCCACGTGTCTTACGTACCTGACGAGGAGATCGGAGGGGTAGACGGGGCGATGAAGTTCGTAGGGTCGAAGGAGTTCGAGGAATTGAACTTAGGGTTTGTGATGGACGAAGGACAAGCATCTCCGACCGACGAATTTAGGGTTTTCTACGCCGATCGATTGCCTTGGCATGTTACGATTAAGGCTACGGGGAGGCCTGGGCACGGTTCCAAGATGTTTGATAATAGTGCGATGGAGAATTTGATGAAAAGTATTGAGATGATGAGTAAATTTAGGGAAGCTCAGTTTGATTTGGTTAAGAGAGGCTGGGCTTCTAATTCTGAAGTTGTTTCTGTTAATCCTGTGTTTCTGAATGCTGGAATTCCTACATCTAATGTTAGTTCTTTTGAATTCGTTAGTTATGTGTGTTTGGCAATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_211478.p1 GENE.R_Transcript_211478~~R_Transcript_211478.p1 ORF type:5prime_partial len:170 (-),score=15.73,Peptidase_M20|PF01546.24|2.9e-07 R_Transcript_211478:19-528(-)
GAQDDKCIGVQYLEAIKNLRELQDFKPIRTVHVSYVPDEEIGGVDGAMKFVGSKEFEELNLGFVMDEGQASPTDEFRVFYADRLPWHVTIKATGRPGHGSKMFDNSAMENLMKSIEMMSKFREAQFDLVKRGWASNSEVVSVNPVFLNAGIPTSNVSSFEFVSYVCLAI*

Click here to download the sequence:
Link to NCBI Protein BLAST