Transcript Information: R_Transcript_211516.p1


Annotated TAIR IDAT1G72390.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Spt20 family (InterPro:IPR021950); Has 8778 Blast hits to 7244 proteins in 477 species: Archae - 6; Bacteria - 326; Metazoa - 4198; Fungi - 1506; Plants - 923; Viruses - 22; Other Eukaryotes - 1797 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:27245455-27251218 | Forward length=1325
E-Value1E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.45813475192305
Condition 2: 8 Hour
Replicate 10.24485864947245
Replicate 21.3416529104711
Replicate 30
Condition 3: 24 Hour
Replicate 10.68873421683112
Replicate 20.44110517781155
Replicate 30.87550818747589


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_211516.p1 GENE.R_Transcript_211516~~R_Transcript_211516.p1 ORF type:internal len:100 (-),score=15.65 R_Transcript_211516:3-299(-)
CAGCAGGTGGGATCACCTTCGACACTAGGAATTCCACACCCCATAAGTCAACAGGTTACACCACAGCAACAACAAGCGAGCCCACAACAAATGGGGCAACGGACTCCGATGAGCCCGCCTTTGAGTTCGGGGCCCATGCATCCAATGAGTGCTGGTAACCAAGAGGCTTGTCCTGCAAGCCCCGCCTTGAGCTCTCAAACCTTAGGCTCTGTTGGGAGCATAACAAATTCTCCTATGGATATGAATGTTAAAGTTAGAGCATGGACTGAGGTTTTTCATGGCCAGTCCTTACACGGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_211516.p1 GENE.R_Transcript_211516~~R_Transcript_211516.p1 ORF type:internal len:100 (-),score=15.65 R_Transcript_211516:3-299(-)
QQVGSPSTLGIPHPISQQVTPQQQQASPQQMGQRTPMSPPLSSGPMHPMSAGNQEACPASPALSSQTLGSVGSITNSPMDMNVKVRAWTEVFHGQSLHG

Click here to download the sequence:
Link to NCBI Protein BLAST