Transcript Information: R_Transcript_211608.p1


Annotated TAIR IDAT4G38920.1
Annotated Gene Namevacuolar-type H(+)-ATPase C3
Annotated Gene Symbol(s)AVA-P3, ATVHA-C3, VHA-C3
Annotation TypeOrtholog
Chromosome Positionchr4:18147330-18148853 | Forward length=164
E-Value6E-71
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.39680349901563
Replicate 20
Replicate 30.16599085214603
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.31721311140431


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_211608.p1 GENE.R_Transcript_211608~~R_Transcript_211608.p1 ORF type:5prime_partial len:138 (+),score=22.34,ATP-synt_C|PF00137.17|1.3e-11,ATP-synt_C|PF00137.17|1.5e-23 R_Transcript_211608:2-415(+)
TCAGCCCTCGTCTTCGCATGTTTGGGTGCTGCTTACGGTACCGCTAAGAGTGGTGTTGGAATTGCATCTATGGGTGTCATGCGACCTGAATTGGTTATGAGATCTATCATTCCAGTAGTTATGGCTGGTGTCATTGGTATCTACGGTCTGATTATTGCTGTCATTATTGGAACATCTGTCACAACCAAAACAAAAGATCTTGAAGGATTTGCCAAATTGGCATCTGGATTGTGTGTTGGACTCAGTGGTTTGGCTGCTGGAATGGCCATTGGTGTTGTTGGAGATGCTGGTGTGAGAGCTACCGCTCAACAACCAAGACTCTTCGTCGGAATGATTTTGATTCTCATTTTCGCTGAAGCCTTGGCCCTGTACGGTTTGATCGTTGGTCTCATCCTCTCCACTGTCCAAGGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_211608.p1 GENE.R_Transcript_211608~~R_Transcript_211608.p1 ORF type:5prime_partial len:138 (+),score=22.34,ATP-synt_C|PF00137.17|1.3e-11,ATP-synt_C|PF00137.17|1.5e-23 R_Transcript_211608:2-415(+)
SALVFACLGAAYGTAKSGVGIASMGVMRPELVMRSIIPVVMAGVIGIYGLIIAVIIGTSVTTKTKDLEGFAKLASGLCVGLSGLAAGMAIGVVGDAGVRATAQQPRLFVGMILILIFAEALALYGLIVGLILSTVQG*

Click here to download the sequence:
Link to NCBI Protein BLAST