Transcript Information: R_Transcript_211627.p1


Annotated TAIR IDAT1G09890.1
Annotated Gene NameRhamnogalacturonate lyase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:3214237-3217386 | Reverse length=617
E-Value2.5E-77
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.51057233439773
Replicate 20
Replicate 30.16018697619687
Condition 2: 8 Hour
Replicate 10
Replicate 20.31273960617043
Replicate 30.38080302000812
Condition 3: 24 Hour
Replicate 10.32108821297488
Replicate 20.30846515930877
Replicate 30.30612174387269


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_211627.p1 GENE.R_Transcript_211627~~R_Transcript_211627.p1 ORF type:internal len:143 (+),score=16.41,CBM-like|PF14683.2|1.6e-38 R_Transcript_211627:2-427(+)
CCTGATCGGACTGCTCGAGAATTTTACATCCCTGATCCTGATCCTATGTATGTCAATAAACTCTACGTCAACCATCCTGACAGGTTTAGACAGTATGGTCTTTGGGATAGATATTCCTACTTATATCCTGATAAAGATCTTGTTTATACAGTTGGTGAAAGTGATTACCAGAAGGACTGGTTCTTTGCTCAGGTTACCAGGAGGAAAGGCAACACGTACCAAGGAACAACATGGCAAATCAAGTTCAAACTTGACAATGTGAATCAGAATGGTGTGTATAAGCTGCGATTGGCACTCGCAACAGCAAATATGGCAGAATTACAGGTTCGAGTAAACGATCCAAGTGCGAATTCTCCAATATTCACGACTGGACTAATAGGGAAAGACAATGCAATTGCAAGACATGGGATTCATGGGCTCTACAGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_211627.p1 GENE.R_Transcript_211627~~R_Transcript_211627.p1 ORF type:internal len:143 (+),score=16.41,CBM-like|PF14683.2|1.6e-38 R_Transcript_211627:2-427(+)
PDRTAREFYIPDPDPMYVNKLYVNHPDRFRQYGLWDRYSYLYPDKDLVYTVGESDYQKDWFFAQVTRRKGNTYQGTTWQIKFKLDNVNQNGVYKLRLALATANMAELQVRVNDPSANSPIFTTGLIGKDNAIARHGIHGLYR

Click here to download the sequence:
Link to NCBI Protein BLAST