Transcript Information: R_Transcript_21176.p1


Annotated TAIR IDAT5G23340.1
Annotated Gene NameRNI-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:7856314-7857983 | Forward length=405
E-Value6.9E-214
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.774907215428
Replicate 212.447806675377
Replicate 315.816556911629
Condition 2: 8 Hour
Replicate 112.301232152068
Replicate 214.800774171071
Replicate 316.120358955725
Condition 3: 24 Hour
Replicate 116.125126505173
Replicate 211.762804741641
Replicate 316.155210602234


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_21176.p1 GENE.R_Transcript_21176~~R_Transcript_21176.p1 ORF type:complete len:420 (+),score=63.64,LRR_4|PF12799.3|1.2,LRR_4|PF12799.3|0.38,LRR_4|PF12799.3|0.019,LRR_4|PF12799.3|0.0011,LRR_4|PF12799.3|2.2,LRR_4|PF12799.3|1.7,LRR_6|PF13516.2|3.7e+02,LRR_6|PF13516.2|2.6e+02,LRR_6|PF13516.2|2.4,LRR_6|PF13516.2|46,LRR_6|PF13516.2|27,LRR_6|PF13516.2|0.009,LRR_6|PF13516.2|14,LRR_6|PF13516.2|8.5,LRR_6|PF13516.2|3.9e+03,LRR_6|PF13516.2|4.6,LRR_6|PF13516.2|2.8e+02,LRR_1|PF00560.29|2.3e+02,LRR_1|PF00560.29|3.5e+03,LRR_1|PF00560.29|47,LRR_1|PF00560.29|1e+02,LRR_1|PF00560.29|2.7e+03,LRR_1|PF00560.29|1.7e+02,LRR_1|PF00560.29|1.6e+04,LRR_1|PF00560.29|2.5e+02,LRR_1|PF00560.29|1.6e+03,LRR_1|PF00560.29|3.5e+02,LRR_1|PF00560.29|1.1e+02,LRR_1|PF00560.29|30 R_Transcript_21176:297-1556(+)
ATGACCATGACGATGATGAATGGAGACGGAGATGGAGAAGAAGTGGTATGCATAAACGAAATCCTAAGAGACGACGAACTTCGAGCAATACTGGCAAAGATAGAGAGCGACAAAGACAAGGAAGTGTTTGGATTGGTGTGCAAGAGATGGCTGTACCTGCAAAGCACAGAAAGGAAGAAGCTCTGTGCACGTGCTGGCCCACACATGCTTGGTAAAATGGCGGCTCGTTTTTCAAGGCTTCAGGAACTGGACCTTTCTCAGTCTCTTTCTAGATCCTTCTACCCAGGTGTCACTGATTCTGACCTCTCTGTTATTTCCTCCGGCTTCCCTTGCCTCCGTCTTCTCAACCTCCTCAACTGTAAAGGCATCACAAATGCTGGGTTGCTTTCTATAGCTAGCAATCTTCACTCTCTGCAGTCATTGGATGTATCATATTGCAGAAAATTGACGGACAAGGGCTTGTCTGCTGTGGCTCACGGTTGTAATGACTTAAGAAGCTTGCATCTTGCTGGGTGCAAATTCATAACTGATTGTGTATTGAAAGCTCTTTCCGAATCTTGTCACAATCTAGAAGAGTTGGGTCTCCAAGGATGCACTAGGGTAACTGACTCTGGGCTTTCTGTTCTTGTAAGTGGATGTAAAAGGCTCACCTATTTAGATTTGAACAAGTGCACAAATGTAGGAGATAGTGGTGTGTCTAGTATTTCAGAAGCCTGTTCCGCGTCTCTAAGGACTCTGAAACTGCTGGATTGCTACAAAGTCGGAAATCAGGGTGTCTCACACTTGGCCGAGTTCTGCAAGAGTCTAGAGACTCTAATTATAGGTGGCTGTCGCGACATCTCTGACAAGTCGCTGAAATCATTAGCTGTTTCCTGTAACGGAAGCCTGAAGAACCTCCGGATGGATTGGTGTTTGAGCATCACCGACTCTTCTCTGAGTTGCATTCTTTCGCACTGCAAGAATTTAGAAGCCCTCGACATAGGATGCTGTGAAGAAGTGACTGATGCTGCTTTCCAGAGTTTAGGCACTGGAGAAGATTATGCAGCAAATTTGAAGGTCTTGAAGGTCAGTAACTGCCCAAAGATCACAGTGGCGGGATTAGCTTTTGTCCTGGATGCCTGCAAACTCTTAGAATACCTTGATGTCAGGTCTTGCCCACATATCTCGAAGGCTGGTCTTGATGAAGCTGGCCTTCAACCCCCTCAAACTTGTAAGGTGAATTTTAACGGGAGTTTGACAGAGCCAGATGTATTGCTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_21176.p1 GENE.R_Transcript_21176~~R_Transcript_21176.p1 ORF type:complete len:420 (+),score=63.64,LRR_4|PF12799.3|1.2,LRR_4|PF12799.3|0.38,LRR_4|PF12799.3|0.019,LRR_4|PF12799.3|0.0011,LRR_4|PF12799.3|2.2,LRR_4|PF12799.3|1.7,LRR_6|PF13516.2|3.7e+02,LRR_6|PF13516.2|2.6e+02,LRR_6|PF13516.2|2.4,LRR_6|PF13516.2|46,LRR_6|PF13516.2|27,LRR_6|PF13516.2|0.009,LRR_6|PF13516.2|14,LRR_6|PF13516.2|8.5,LRR_6|PF13516.2|3.9e+03,LRR_6|PF13516.2|4.6,LRR_6|PF13516.2|2.8e+02,LRR_1|PF00560.29|2.3e+02,LRR_1|PF00560.29|3.5e+03,LRR_1|PF00560.29|47,LRR_1|PF00560.29|1e+02,LRR_1|PF00560.29|2.7e+03,LRR_1|PF00560.29|1.7e+02,LRR_1|PF00560.29|1.6e+04,LRR_1|PF00560.29|2.5e+02,LRR_1|PF00560.29|1.6e+03,LRR_1|PF00560.29|3.5e+02,LRR_1|PF00560.29|1.1e+02,LRR_1|PF00560.29|30 R_Transcript_21176:297-1556(+)
MTMTMMNGDGDGEEVVCINEILRDDELRAILAKIESDKDKEVFGLVCKRWLYLQSTERKKLCARAGPHMLGKMAARFSRLQELDLSQSLSRSFYPGVTDSDLSVISSGFPCLRLLNLLNCKGITNAGLLSIASNLHSLQSLDVSYCRKLTDKGLSAVAHGCNDLRSLHLAGCKFITDCVLKALSESCHNLEELGLQGCTRVTDSGLSVLVSGCKRLTYLDLNKCTNVGDSGVSSISEACSASLRTLKLLDCYKVGNQGVSHLAEFCKSLETLIIGGCRDISDKSLKSLAVSCNGSLKNLRMDWCLSITDSSLSCILSHCKNLEALDIGCCEEVTDAAFQSLGTGEDYAANLKVLKVSNCPKITVAGLAFVLDACKLLEYLDVRSCPHISKAGLDEAGLQPPQTCKVNFNGSLTEPDVLL*

Click here to download the sequence:
Link to NCBI Protein BLAST