Transcript Information: R_Transcript_211845.p1


Annotated TAIR IDAT5G28730.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 496 Blast hits to 496 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 23; Plants - 470; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:10779003-10780218 | Forward length=296
E-Value2E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.21474071711434
Replicate 20
Replicate 30.53898206108594
Condition 2: 8 Hour
Replicate 10.28806899937935
Replicate 20
Replicate 30.85419344095939
Condition 3: 24 Hour
Replicate 10.54018369947539
Replicate 20.25947363400679
Replicate 30.51500481616229


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_211845.p1 GENE.R_Transcript_211845~~R_Transcript_211845.p1 ORF type:5prime_partial len:85 (+),score=1.17,DDE_Tnp_4|PF13359.2|2.6e-07 R_Transcript_211845:1-255(+)
ACTTATCCAACGCAAAATGTGATGGCAATTTGTGACTTTGATATGTTGTTCACCTTTGTTCAAACTGGTTGGGAGGGTTCCACTCATGACACACGCATTCTTATCGCTATGTTGGAAAAGTTTAAAGGCAAGGAGATATTTCCATTTGCTCCTGAAAGTATGTACTTTATAGCCCTTAAAGTTTTTTGTTCAATTTGTTTCTTCTTCCAATTTTGTTTTTTTTTGTATTCTTATTTGGATCAATTCGCTGTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_211845.p1 GENE.R_Transcript_211845~~R_Transcript_211845.p1 ORF type:5prime_partial len:85 (+),score=1.17,DDE_Tnp_4|PF13359.2|2.6e-07 R_Transcript_211845:1-255(+)
TYPTQNVMAICDFDMLFTFVQTGWEGSTHDTRILIAMLEKFKGKEIFPFAPESMYFIALKVFCSICFFFQFCFFLYSYLDQFAV*

Click here to download the sequence:
Link to NCBI Protein BLAST