Transcript Information: R_Transcript_212168.p1


Annotated TAIR IDAT4G20520.1
Annotated Gene NameRNA binding;RNA-directed DNA polymerases
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:11045912-11047716 | Forward length=376
E-Value3E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.56220618957039
Replicate 20.21556776608109
Replicate 30.32925495518084
Condition 2: 8 Hour
Replicate 10.15083695039371
Replicate 20.18366227384957
Replicate 30.33545070961701
Condition 3: 24 Hour
Replicate 10.28284772765138
Replicate 20.22644002967738
Replicate 30.44943952129153


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_212168.p1 GENE.R_Transcript_212168~~R_Transcript_212168.p1 ORF type:complete len:487 (+),score=52.12,RVT_1|PF00078.23|1.1e-42 R_Transcript_212168:302-1762(+)
ATGGGCCCATATAAGGCCCCCGAACCCGATGGGTTTCATGCAATTTTTTTCCAAAAGATGTGGGACGTAGTTGGGGACTCTTTATGCCGCTTTGCCCTTGAATTCTTCAATCTCAATCATCTTCCAGAGGGCTTGAACGATACTTTATTAGTTCTTATACCAAAGATCCCAAGCCCTGAACGCATGAACCAATTGCGACCCATTGCGCTGTGTAATGTTGTCTACAAAATCCTCACTAAAGTAATTGCAAACAGGATCAAATTGGTGCTCCCAAAGTTGATAGCCCCTAACCAAGCTAGCTTCGTGCCGGGCCGCCAGATTTCTGACAATATTGTTGTTACTCAAGAAGTCATTCATGCAATGAAGAAGAGAACTTCGGGAGTGGGTTGGATGGCTATCAAAATTGATCTTGAAAAAGCTTACGATCGCCTAAATTGGGACTTCATCTATGACACCCTCGTAGATCTCCCTTTTCCAGTTTCCATGATCGGTGCTATCATGTCCTGTATTACTAGCTCTCGAATGAGTGTGCTGTGGAATGGGGAAAAGACTGAGTTTTTTAAGCCCACCCGTGGAATACGACAAGGCGATCCCTTGTCCCCCTATATTTTTGTACTATGTATGGAGAGGTTGGGGCATCGTATCCAGATGGCAGTGGATGACAAGGCATGGAAACCCCATCGGATTGCTCGGAAGGCCCCTCTGTTAAGCCATTTGTTCTTCGCCGACAATCTTATCCTGTTTGCTGAGGCCACTATGAGCCAAGTTGAGGTGGTTCTAAATTGTCTTGAGGAATTCTGCATTTCCTCGAGTCAGAAGGTTAATAAAATGAAGTTGGCTATTTACTTCTCCAAAGGTGTCCCACGTGTGGAACAAGACTTGTTGAGCAAAGAACTCGGTATACCTGCCACAGACAATTTAGGTAATTATCTTGGGGTTCCTATTATTCATAATAGGGTTACTCAAAATACTTACAAATATGTACTCGAAAAAGTCAATAAAAGATTGGCAGGATGGAAAGCAAAGCAACTTAGTTTGGCTGGGCGATTCACACTGATCAAGTCGGTCACTTCAACTATACCAAATCATGTAATGCAAACAGCTCTTCTTCCTGCGACTATTTGCAAAGAGTTGGATAGGAAGAGTAGAGACTTCCTGTGGGGTGACACAGTCGACAAAAAGAAACCTCACTTGGTTAATTGGGATCAAATTTGTAGGCCAAAGAAAGTTGGAGGACTCGGCATACGTTTAGCAAGACAGGCCAATAGATCCCTTCTCTCAAAGCTAGGATGGCGCTTGCTCAAGGAACTTGACTCACTCTGGTCTCGTATTTTGAAGGCAAAATATGCTAATGGCAAGCATGGTCGGATATTCTTACAAGGCATTCTGGAGCCTCTCATCTTTGGCGTGGTCTCACAAGGTGTACCTCGACTATCAAACAAGGTTTGGGATGGAATGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_212168.p1 GENE.R_Transcript_212168~~R_Transcript_212168.p1 ORF type:complete len:487 (+),score=52.12,RVT_1|PF00078.23|1.1e-42 R_Transcript_212168:302-1762(+)
MGPYKAPEPDGFHAIFFQKMWDVVGDSLCRFALEFFNLNHLPEGLNDTLLVLIPKIPSPERMNQLRPIALCNVVYKILTKVIANRIKLVLPKLIAPNQASFVPGRQISDNIVVTQEVIHAMKKRTSGVGWMAIKIDLEKAYDRLNWDFIYDTLVDLPFPVSMIGAIMSCITSSRMSVLWNGEKTEFFKPTRGIRQGDPLSPYIFVLCMERLGHRIQMAVDDKAWKPHRIARKAPLLSHLFFADNLILFAEATMSQVEVVLNCLEEFCISSSQKVNKMKLAIYFSKGVPRVEQDLLSKELGIPATDNLGNYLGVPIIHNRVTQNTYKYVLEKVNKRLAGWKAKQLSLAGRFTLIKSVTSTIPNHVMQTALLPATICKELDRKSRDFLWGDTVDKKKPHLVNWDQICRPKKVGGLGIRLARQANRSLLSKLGWRLLKELDSLWSRILKAKYANGKHGRIFLQGILEPLIFGVVSQGVPRLSNKVWDGM*

Click here to download the sequence:
Link to NCBI Protein BLAST