Transcript Information: R_Transcript_212267.p1


Annotated TAIR IDAT1G55020.1
Annotated Gene Namelipoxygenase 1
Annotated Gene Symbol(s)LOX1, ATLOX1
Annotation TypeOrtholog
Chromosome Positionchr1:20525798-20530143 | Forward length=859
E-Value9.5E-55
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1408100596699
Replicate 20.49210079100699
Replicate 30.53687666240982
Condition 2: 8 Hour
Replicate 10.76518327960141
Replicate 21.0481663363056
Replicate 30.99266620580241
Condition 3: 24 Hour
Replicate 10.17935786896644
Replicate 20.5169201302479
Replicate 30.51299307859916


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_212267.p1 GENE.R_Transcript_212267~~R_Transcript_212267.p1 ORF type:internal len:128 (+),score=35.24,Lipoxygenase|PF00305.15|1.8e-32 R_Transcript_212267:3-383(+)
TTGAAGTTGTCAGATTTCCTCGCCTATGCGCTCAAGTCCTTGTCTCAGGACTTGGTTGCTGGGCTTGAGTCTGTATTTGATAAGACCCCGAATGAGTTTGACAGTTTTCAAGATGAACTGGATCTGTACAAAGGAGGAATCAAGCTGCCAGACAGTCCTCTGATCGAAATGATAAAGGACAACATTCCATTTGAATTCCTAAAAGCATTGCTTCAAACTGATGGTGCACCCCTTCTGAAGTTCCCAATGCCACAATTAATCAAAGAGGAAAAGTCAGCATGGAGTACTGATGAAGAATTTGCAAGGGAAATGCTAGCTGGGGTGAATCCTCTTGTCATTAGCCGCCTTGAGGAATTTCCTCCAATCAGCAAACTAGATCCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_212267.p1 GENE.R_Transcript_212267~~R_Transcript_212267.p1 ORF type:internal len:128 (+),score=35.24,Lipoxygenase|PF00305.15|1.8e-32 R_Transcript_212267:3-383(+)
LKLSDFLAYALKSLSQDLVAGLESVFDKTPNEFDSFQDELDLYKGGIKLPDSPLIEMIKDNIPFEFLKALLQTDGAPLLKFPMPQLIKEEKSAWSTDEEFAREMLAGVNPLVISRLEEFPPISKLDP

Click here to download the sequence:
Link to NCBI Protein BLAST