Transcript Information: R_Transcript_212923.p1


Annotated TAIR IDAT1G33980.2
Annotated Gene NameSmg-4/UPF3 family protein
Annotated Gene Symbol(s)ATUPF3, UPF3
Annotation TypeHomolog
Chromosome Positionchr1:12351719-12354401 | Forward length=484
E-Value0.0008
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.33491671476548
Replicate 26.9345579356581
Replicate 32.5218426711361
Condition 2: 8 Hour
Replicate 10
Replicate 23.6926226893701
Replicate 33.3305707560343
Condition 3: 24 Hour
Replicate 13.5805754391832
Replicate 22.4281018962103
Replicate 33.8152879729454


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_212923.p1 GENE.R_Transcript_212923~~R_Transcript_212923.p1 ORF type:5prime_partial len:109 (+),score=12.23 R_Transcript_212923:2-328(+)
GCAGTGTCGAAGTTACTGTTCCTTCAGGAGGCCGAAACAGTTCATATACAGAAAATGGTCGGTTTTCTTCATGCTTTATTTCAGCTTTTCTTTTTATGTCCATCGGCCCTGGATCTAAGAAAATCTTGCTTTCAAGGTCCATTTCATGTTATTCAAGTCTGTACTTTAAGTTTTAATGTATTATGGGCAGGTTCCCGTAGGCATTTTGGTCGCCGGGGTCCTACACACAGTGGGAAGGATGATGGCTCTTCAAAAAGGGGAGCCACGGCTGGCCATGGTCCCCATGAGAAACAGGTGTGGGTTCAGAAGTCAGCCGCAGGTTCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_212923.p1 GENE.R_Transcript_212923~~R_Transcript_212923.p1 ORF type:5prime_partial len:109 (+),score=12.23 R_Transcript_212923:2-328(+)
AVSKLLFLQEAETVHIQKMVGFLHALFQLFFLCPSALDLRKSCFQGPFHVIQVCTLSFNVLWAGSRRHFGRRGPTHSGKDDGSSKRGATAGHGPHEKQVWVQKSAAGS*

Click here to download the sequence:
Link to NCBI Protein BLAST