Transcript Information: R_Transcript_21306.p1


Annotated TAIR IDAT3G62310.1
Annotated Gene NameRNA helicase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:23057516-23060561 | Reverse length=726
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 155.058931537385
Replicate 226.489852990973
Replicate 341.891088617621
Condition 2: 8 Hour
Replicate 146.020009188521
Replicate 254.217480628628
Replicate 366.216080934371
Condition 3: 24 Hour
Replicate 169.502402703049
Replicate 248.551782242682
Replicate 365.902979317535


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_21306.p1 GENE.R_Transcript_21306~~R_Transcript_21306.p1 ORF type:complete len:730 (+),score=150.75,HA2|PF04408.19|2.5e-24,OB_NTP_bind|PF07717.12|1.8e-22,Helicase_C|PF00271.27|1.9e-11,AAA_22|PF13401.2|4e-09,DEAD|PF00270.25|8.4e-07 R_Transcript_21306:245-2434(+)
ATGGGGACAGAGAGAAAGAGGAAGGTGAGTTTGTTCGACGTTGTGGACGACAGTGCCTTGCCTGGCAAGGCCCTTAAAGCGAACGGTTCTGCCATCATGAATGGGAACAATAACACCAATTTGACGGTCAATCGGTGGAATGGAAGGCCGTACACTCAGAGATTTTTCGAGATTTTGGAGAAGAGAAAATCTTTGCCTGTTTGGCAACAGAAAGAGGAGTTCTTGCAGGTCTTGAAGGATAATCAGATTCTTATCTTGGTCGGTGAAACTGGTAGTGGTAAAACTACTCAGATTCCACAATTTGTTTTGGAAGCTGTTGATATGGATTCTGCAGACAAACGACGGAAAATGATGGTTGGCTGTACACAACCACGTAGAGTGGCAGCTATGTCGGTTTCCCGTAGAGTTGCTGAGGAAATGGATGTGACCCTAGGGGAAGAAGTTGGTTACAGCATTCGTTTTGAGGACTGTAGCAGTTCGAGAACGGTTTTAAAGTATCTGACAGATGGTATGCTTTTGAGAGAAGCAATGACTGATCCGCTTCTGGAGAGGTACAAAGTTATAATTCTTGATGAAGCTCACGAGAGGACATTGGCAACAGATGTTCTCTTTGGGCTTTTGAAGGAAGTGTTGAGAAATAGATCAGACTTGAAGTTGGTTGTCATGAGTGCAACTCTTGAGGCAGAAAAATTTCAGGAGTATTTTTATGGTGCACCTCTTATGAAAGTTCCCGGGAGGCTTCATCCTGTGGAAATTTTTTACACCCAGGAGCCTGAAAGAGACTATTTAGAAGCTGCTATTCGGACAGTAGTTCAGATACACATGTGTGAACCACCGGGTGACATACTAGTTTTTCTCACGGGAGAGGAGGAGATAGAGGACGCTTGCCGTAAGATTACAAAAGAAGTTGGGAACATGGGTGACCAAGTTGGCCCAGTGAAGGTGGTTCCTTTGTATTCTACTCTTCCCCCGGCAATGCAACAGAAAATATTTGAAGCTGCCCCACCACCGACAAAAGAGGGAGGTCCTGCTGGAAGGAAAATAGTGGTCTCTACCAACATTGCAGAAACGTCTTTGACCATTGATGGTATAGTCTACGTTATTGACCCGGGTTTTGCGAAACAGAAAGTTTATAACCCTCGGGTTCGTGTTGAATCTTTGCTGGTTTCCCCTATATCTAAGGCAAGTGCACACCAGAGAGCTGGTCGTGCTGGAAGAACACAGCCGGGTAAATGCTTTAGGCTATACACAGAGAAGAGTTTTCACAATGATCTCCAGCCTCAGACATATCCAGAAATTTTGCGGTCTAATCTGGCAAATACTGTTCTGACGCTAAAGAAACTGGGTATTGATGATCTGGTGCATTTTGACTTTATGGACCCTCCAGCTCCGGAGACACTGATGCGAGCCCTGGAGGTGCTGAATTATCTTGGAGCTTTGGATGATGATGGTAACCTGACCAGACTTGGAGAGATCATGAGCGAATTTCCGCTGGACCCCCAGATGGCAAAGATGCTTGTTGTGAGTCCTGAGTTCAACTGTTCAAATGAGATCCTTTCTGTTTCAGCTATGCTTTCAGTACCCAATTGCTTTGTGAGGCCTAGGGAGGCCCAGAAAGCTGCAGATGAAGCAAAAGCCAGGTTTGGGCACATTGATGGGGATCACCTGACGCTGTTGAATGTATACCATGCATACAAGCAAAATCAGGAGGACCCCAACTGGTGTTACGAGAATTTTATCAACCAGAGGGCACTGAAGAATGCAGATAATGTGAGGACGCAGCTGGTGCGCATTATGACTAGGTTCAACCTGAAGCTATGCAGCACAGATTTCAACAGCAGGGATTACTACATCAACATACGGAAAGCGATGCTAGCTGGATATTTTATGCAGGTAGCTCATCTGGAAAAAACCGGACACTATTTGACTGTGAAAGACAATCAGGTTGTTCACCTGCACCCTTCAAATTGTCTGGACCACAAGCCAGAATGGGTCATATATAATGAATATGTGCTGACTAGCCGGAATTTTATTCGTACTGTCACTGATATCAAGGGCGAATGGATTGTTGATATAGCACCTCACTACTATGATCTTACGAATTTCCCCAACTGTGAAGCAAAACGTGTTCTGGAGAGGCTTTACAAGAAGCGTGAGAGAGATAGGGAAGAGAGTAAGAATAGAAGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_21306.p1 GENE.R_Transcript_21306~~R_Transcript_21306.p1 ORF type:complete len:730 (+),score=150.75,HA2|PF04408.19|2.5e-24,OB_NTP_bind|PF07717.12|1.8e-22,Helicase_C|PF00271.27|1.9e-11,AAA_22|PF13401.2|4e-09,DEAD|PF00270.25|8.4e-07 R_Transcript_21306:245-2434(+)
MGTERKRKVSLFDVVDDSALPGKALKANGSAIMNGNNNTNLTVNRWNGRPYTQRFFEILEKRKSLPVWQQKEEFLQVLKDNQILILVGETGSGKTTQIPQFVLEAVDMDSADKRRKMMVGCTQPRRVAAMSVSRRVAEEMDVTLGEEVGYSIRFEDCSSSRTVLKYLTDGMLLREAMTDPLLERYKVIILDEAHERTLATDVLFGLLKEVLRNRSDLKLVVMSATLEAEKFQEYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDACRKITKEVGNMGDQVGPVKVVPLYSTLPPAMQQKIFEAAPPPTKEGGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRAGRAGRTQPGKCFRLYTEKSFHNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTRLGEIMSEFPLDPQMAKMLVVSPEFNCSNEILSVSAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNQEDPNWCYENFINQRALKNADNVRTQLVRIMTRFNLKLCSTDFNSRDYYINIRKAMLAGYFMQVAHLEKTGHYLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDIKGEWIVDIAPHYYDLTNFPNCEAKRVLERLYKKRERDREESKNRR*

Click here to download the sequence:
Link to NCBI Protein BLAST