Transcript Information: R_Transcript_213188.p1


Annotated TAIR IDAT4G25270.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:12937253-12938836 | Reverse length=527
E-Value1.6E-210
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.87091662607008
Replicate 20.29219503561449
Replicate 30.31878163652697
Condition 2: 8 Hour
Replicate 10.43811686784335
Replicate 20.53346040177779
Replicate 30.93825422689873
Condition 3: 24 Hour
Replicate 10.9128352774435
Replicate 20.57001663136681
Replicate 30.73974349836432


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_213188.p1 GENE.R_Transcript_213188~~R_Transcript_213188.p1 ORF type:5prime_partial len:503 (+),score=95.07,PPR|PF01535.16|0.0046,PPR|PF01535.16|1.2e-07,PPR|PF01535.16|0.0015,PPR|PF01535.16|3.8e-07,PPR|PF01535.16|2.2,PPR|PF01535.16|1.9e+02,PPR|PF01535.16|0.00083,PPR|PF01535.16|0.26,PPR|PF01535.16|5.3e+03,PPR|PF01535.16|9,PPR_2|PF13041.2|2.7e+03,PPR_2|PF13041.2|0.086,PPR_2|PF13041.2|6.5e-09,PPR_2|PF13041.2|0.53,PPR_2|PF13041.2|2.4e-09,PPR_2|PF13041.2|1.4e+02,PPR_2|PF13041.2|0.00034,PPR_2|PF13041.2|0.15,PPR_2|PF13041.2|51,PPR_2|PF13041.2|1e+04,PPR_2|PF13041.2|87,PPR_3|PF13812.2|0.87,PPR_3|PF13812.2|0.00094,PPR_3|PF13812.2|0.18,PPR_3|PF13812.2|1e+02,PPR_3|PF13812.2|1.2e+02,PPR_3|PF13812.2|1e+02,PPR_3|PF13812.2|0.31,PPR_3|PF13812.2|7,PPR_3|PF13812.2|5.2e+03,PPR_3|PF13812.2|2.8e+02,PPR_1|PF12854.3|0.043,PPR_1|PF12854.3|1.3,PPR_1|PF12854.3|2.5e+03,PPR_1|PF12854.3|0.51,PPR_1|PF12854.3|0.026,PPR_1|PF12854.3|1.3e+03,PPR_1|PF12854.3|25,PPR_1|PF12854.3|1.3e+02,PPR_1|PF12854.3|2.6,PPR_1|PF12854.3|1.3 R_Transcript_213188:1-1509(+)
CAGAGGAAACCCAGAAAAAGAAACACGAAAAAGAAGAACAGGGTATATCAACTTAATCAAAACAAAAGCAAGAAACTTTCTTCTTTAACCCCACTTATTCTTCAACCCAAACAAAACCCACAGACCCAAACAAAAATCCAAGCCCTTGATGCCATTGTTCATGATCTTGAACAAGCATATTTTAAAAATGGCATTTTTGTTGATACCCAAACTTTGTGCTCTCTTTTAGAAACTTGTTACAAGTTGAATGCTATTGATCATGGTGTTCGAATTCATCGCTTGATCCCAAGAAAGATTTTGTTCAATAATGTTGGGGTTGTGTCCAAATTGCTCAGATTGTATGCTGCAAATGGGTTTGTTGATGACGCACACCAACTGTTTGATGAAATGCCTGAGAGAGCTGAATCAGCTTTTCCTTGGAATTCTCTTATTTCAGGGTATGTTGGGCTGGGAATGTATGAGGATGCACTTGCCCTTTTCTTTCAGATGGAAGAAGAGGGTGTTGAGCCTGATAGACATACCTTTCCTCGTGCTTTGAGGGCTTGTAGTGGTATTGGTTCGATTCGTGTTGGGGAAGAAATCCATCGTAAGGTTGTCCGTTATGGATTTTTCGATGATGGGTTTGTTCTTAATGCTCTTGTTGATATGTATTCTAAATGTGGTGACATTGTCAAAGCAAGAAAGGTTTTTGATCGAATCACTTCTAAGGACTTGGTTTCATGGAATACAATGATAATGGGGTATATTCATCATGGACTCTTAGGCAATGGGATTGAGATTTTTCGCCAAATGCTTAAAGATGGATTTCACCCTGATGAAATTAGTATATCAACAATTGTTAAAGGAGTTTCGTCGTTAAAACTTGGAGTTCAATTACATGGATGGGTTCTTCGTCGTGGATTGGAATGGAACTTAACTATAGCAAACTCTTTCATAGCATTTTACTCTTTACATGGCCGTTTGGATCAAGCACGTTGGTTATTCTCCAACATACCTAAAAAGGATATCGTCTCATGGAATTCGATAATTGCTGCTCATAGAAGAGACCCTCGAGCACTAACATACTTCGAGCAAATGGAGGATGTTGATGCAACTCCAGATGCCATCACATTCGTGTCACTGCTATCAGCTTGTGCACATCTTGGATTGATGAGTGAAGGGGAGTCTTTGTTCTCGCTAATGAGAGATGAGTATCGAATTAAACCCGTTATGGAGCATTATGCTTGTATGGTGAATTTGTATGGAAGAGCAGGGTTGATTACTGAGGCTTTTGAGATTCTAGTGAGTAAAATGGAGGTTGAGGCTGGCCCAACCGTGTGGGGAGCATTGTTATATGCTTGTGTTCTTAATGGAACTGCAGAAATAGGTAAGATTGCTGCTCATAAGCTTTTCGAGTTGGAGCCCGACAATGAGCACAACTTTGAACTGCTGATGAGATTATATCACAGTTTGGGCAGATCGGATGATGTAGAAAGAGTTAGAAATATGATGCTAGACCGAGGTCTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_213188.p1 GENE.R_Transcript_213188~~R_Transcript_213188.p1 ORF type:5prime_partial len:503 (+),score=95.07,PPR|PF01535.16|0.0046,PPR|PF01535.16|1.2e-07,PPR|PF01535.16|0.0015,PPR|PF01535.16|3.8e-07,PPR|PF01535.16|2.2,PPR|PF01535.16|1.9e+02,PPR|PF01535.16|0.00083,PPR|PF01535.16|0.26,PPR|PF01535.16|5.3e+03,PPR|PF01535.16|9,PPR_2|PF13041.2|2.7e+03,PPR_2|PF13041.2|0.086,PPR_2|PF13041.2|6.5e-09,PPR_2|PF13041.2|0.53,PPR_2|PF13041.2|2.4e-09,PPR_2|PF13041.2|1.4e+02,PPR_2|PF13041.2|0.00034,PPR_2|PF13041.2|0.15,PPR_2|PF13041.2|51,PPR_2|PF13041.2|1e+04,PPR_2|PF13041.2|87,PPR_3|PF13812.2|0.87,PPR_3|PF13812.2|0.00094,PPR_3|PF13812.2|0.18,PPR_3|PF13812.2|1e+02,PPR_3|PF13812.2|1.2e+02,PPR_3|PF13812.2|1e+02,PPR_3|PF13812.2|0.31,PPR_3|PF13812.2|7,PPR_3|PF13812.2|5.2e+03,PPR_3|PF13812.2|2.8e+02,PPR_1|PF12854.3|0.043,PPR_1|PF12854.3|1.3,PPR_1|PF12854.3|2.5e+03,PPR_1|PF12854.3|0.51,PPR_1|PF12854.3|0.026,PPR_1|PF12854.3|1.3e+03,PPR_1|PF12854.3|25,PPR_1|PF12854.3|1.3e+02,PPR_1|PF12854.3|2.6,PPR_1|PF12854.3|1.3 R_Transcript_213188:1-1509(+)
QRKPRKRNTKKKNRVYQLNQNKSKKLSSLTPLILQPKQNPQTQTKIQALDAIVHDLEQAYFKNGIFVDTQTLCSLLETCYKLNAIDHGVRIHRLIPRKILFNNVGVVSKLLRLYAANGFVDDAHQLFDEMPERAESAFPWNSLISGYVGLGMYEDALALFFQMEEEGVEPDRHTFPRALRACSGIGSIRVGEEIHRKVVRYGFFDDGFVLNALVDMYSKCGDIVKARKVFDRITSKDLVSWNTMIMGYIHHGLLGNGIEIFRQMLKDGFHPDEISISTIVKGVSSLKLGVQLHGWVLRRGLEWNLTIANSFIAFYSLHGRLDQARWLFSNIPKKDIVSWNSIIAAHRRDPRALTYFEQMEDVDATPDAITFVSLLSACAHLGLMSEGESLFSLMRDEYRIKPVMEHYACMVNLYGRAGLITEAFEILVSKMEVEAGPTVWGALLYACVLNGTAEIGKIAAHKLFELEPDNEHNFELLMRLYHSLGRSDDVERVRNMMLDRGL*

Click here to download the sequence:
Link to NCBI Protein BLAST