Transcript Information: R_Transcript_2134.p2


Annotated TAIR IDAT3G15390.1
Annotated Gene Namesilencing defective 5
Annotated Gene Symbol(s)SDE5
Annotation TypeHomolog
Chromosome Positionchr3:5196689-5199531 | Reverse length=490
E-Value2E-29
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.3821541799716
Replicate 29.2501183652222
Replicate 38.1695357860404
Condition 2: 8 Hour
Replicate 17.3628824666541
Replicate 28.1312297604311
Replicate 310.662484560227
Condition 3: 24 Hour
Replicate 18.5088376438344
Replicate 28.9454896199544
Replicate 38.418347956499


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_2134.p2 GENE.R_Transcript_2134~~R_Transcript_2134.p2 ORF type:complete len:143 (+),score=33.99,DUF1771|PF08590.6|1.2e-10 R_Transcript_2134:1293-1721(+)
ATGAAGGAATACTACAAAGCTGCTGTTGAGGCATATTCTAAGGGAGATCAAGAGCGAGCTTTCAAACTTATGAAAGAGGGTCAATTTTATAACATGAAGGCTCGAGAAGCTGATGAAAAGTCCGCACAAAAGCTTTTGGAAACAAGTGATGAGGAAATGTTGCTCAATTTGAGTACCCATGAACCAAAGGAAGCAGTTAAACTCCTGAAGCTTCATCTATCTAATCTTGCTGGCATCTTAAGTATACCTTTTCTCAAGGTCACCGTGGGAAATGACGACGGCGAGAGCAAATGTGGGGGTCCGAAACGATTGGTTCTAAAGCTTTTGGAGAGAGAATCGATCAAATGGGCTGTAGTAGACGATGGAAAGACAATAGTGATTCAGCTGGGTGAAATCAATCCAAAGACCTTGAGTTTTGTCAAAAAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_2134.p2 GENE.R_Transcript_2134~~R_Transcript_2134.p2 ORF type:complete len:143 (+),score=33.99,DUF1771|PF08590.6|1.2e-10 R_Transcript_2134:1293-1721(+)
MKEYYKAAVEAYSKGDQERAFKLMKEGQFYNMKAREADEKSAQKLLETSDEEMLLNLSTHEPKEAVKLLKLHLSNLAGILSIPFLKVTVGNDDGESKCGGPKRLVLKLLERESIKWAVVDDGKTIVIQLGEINPKTLSFVKK*

Click here to download the sequence:
Link to NCBI Protein BLAST