Transcript Information: R_Transcript_213403.p1


Annotated TAIR IDAT4G19170.1
Annotated Gene Namenine-cis-epoxycarotenoid dioxygenase 4
Annotated Gene Symbol(s)NCED4, CCD4
Annotation TypeHomolog
Chromosome Positionchr4:10481835-10483622 | Forward length=595
E-Value1E-57
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.252654183167
Replicate 21.2350764950764
Replicate 31.5720310115007
Condition 2: 8 Hour
Replicate 12.5206037445694
Replicate 21.315345990658
Replicate 32.1354836023985
Condition 3: 24 Hour
Replicate 10.78776789506828
Replicate 21.9460522550509
Replicate 31.5020973804733


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_213403.p1 GENE.R_Transcript_213403~~R_Transcript_213403.p1 ORF type:complete len:204 (+),score=33.86,RPE65|PF03055.11|4.1e-31 R_Transcript_213403:105-716(+)
ATGGAACATGATAGCGGGAATGAGGTGGTGGTAATGGTGGTCACCAACATATCATCCCCCGAACGCACATTGGACGACCAATTTGATTTCAACAACATCTTGATGGAGAAGGTTACCATTAATCTCAAGACAGGGGTGGTTTCAAAGAAGCCATTGTCAGCAAGAAATTTAGACTTTGCGGTCATAAATCAAGCCTATATGGGGAGAAAGAATAAGTATATTTATGCAGGAGTACTTGGTGAATCATTGCCAAAAATAAGCGGAGTTGTGAAGGTGGATGTATCGGCTGCCCAAGTAGACAACAGAGAGTGCATAGTAGCGAGCCGGATGTATGGAGCAAGGTGCTATGGAGGTGAGCCGTATTTCGTCGCGAGGGAACCAGATGATCTTGATGCTGAGGAAGATGATGGGTGCCTTGTGTCATATATCCATGATGAGGAGACGGATGAATCCATGTTCATTGTCATGGATGCCAAGACAAATGATCTTGATATCGTTGCCTCCGTGAAGCTACCCCAACGGGTACCCTATGGGTTACATGGATTGTTTGTAAAGGACAAGGATCTTAAATTATTGTGGGATGCAAACATGTATTCCACTGTCTCAAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_213403.p1 GENE.R_Transcript_213403~~R_Transcript_213403.p1 ORF type:complete len:204 (+),score=33.86,RPE65|PF03055.11|4.1e-31 R_Transcript_213403:105-716(+)
MEHDSGNEVVVMVVTNISSPERTLDDQFDFNNILMEKVTINLKTGVVSKKPLSARNLDFAVINQAYMGRKNKYIYAGVLGESLPKISGVVKVDVSAAQVDNRECIVASRMYGARCYGGEPYFVAREPDDLDAEEDDGCLVSYIHDEETDESMFIVMDAKTNDLDIVASVKLPQRVPYGLHGLFVKDKDLKLLWDANMYSTVSK*

Click here to download the sequence:
Link to NCBI Protein BLAST