Transcript Information: R_Transcript_213404.p1


Annotated TAIR IDAT4G19170.1
Annotated Gene Namenine-cis-epoxycarotenoid dioxygenase 4
Annotated Gene Symbol(s)NCED4, CCD4
Annotation TypeHomolog
Chromosome Positionchr4:10481835-10483622 | Forward length=595
E-Value1E-37
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.34767544675655
Replicate 20.49991191467376
Replicate 30.10907970283882
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.25930872314838
Condition 3: 24 Hour
Replicate 10.65593734936297
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_213404.p1 GENE.R_Transcript_213404~~R_Transcript_213404.p1 ORF type:3prime_partial len:210 (+),score=33.42,RVT_2|PF07727.10|7.5e-26,RPE65|PF03055.11|3.4e-14 R_Transcript_213404:105-731(+)
ATGGAACATGATAGCGGGAATGAGGTGGTGGTAATGGTGGTCACCAACATATCATCCCCCGAACGCACATTGGACGACCAATTTGATTTCAACAACATCTTGATGGAGAAGGTTACCATTAATCTCAAGACAGGGGTGGTTTCAAAGAAGCCATTGTCAGCAAGAAATTTAGACTTTGCGGTCATAAATCAAGCCTATATGGGGAGAAAGAATAAGTATATTTATGCAGGAGTACTTGGTGAATCATTGCCAAAAATAAGCGGAGTTGTGAAGGTGGATGTATCGGCTGCCCAAGTAGACAACAGAGAGTGCATAGTAGCGAGCCGGATGTATGGAGCAAGGTGCTATGGAGGTGAACCGTTTTTCGTGGCCAGAGGACCAGATGATCTTGATGCTAAGGAAGATGATGGGTACCTTAATGGCTATTTGAAAGAGGAAGTTTATGTTGAGCAACCCCCTGGTTTTATTAGCATTGAATTCCCAGATTATGTTTTTAGATTGGACAAGGCATTATATGGTCTCAAACAAGCTCCTCGGGCTTGGTATGAGAGATTGTCCAACTTTCTGTTTGAAAACGGTTTCAAAAGAGGAAAAATTGATAAGACACTGTTTCTAAAAACTAAGAGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_213404.p1 GENE.R_Transcript_213404~~R_Transcript_213404.p1 ORF type:3prime_partial len:210 (+),score=33.42,RVT_2|PF07727.10|7.5e-26,RPE65|PF03055.11|3.4e-14 R_Transcript_213404:105-731(+)
MEHDSGNEVVVMVVTNISSPERTLDDQFDFNNILMEKVTINLKTGVVSKKPLSARNLDFAVINQAYMGRKNKYIYAGVLGESLPKISGVVKVDVSAAQVDNRECIVASRMYGARCYGGEPFFVARGPDDLDAKEDDGYLNGYLKEEVYVEQPPGFISIEFPDYVFRLDKALYGLKQAPRAWYERLSNFLFENGFKRGKIDKTLFLKTKR

Click here to download the sequence:
Link to NCBI Protein BLAST