Transcript Information: R_Transcript_213412.p1


Annotated TAIR IDAT4G19170.1
Annotated Gene Namenine-cis-epoxycarotenoid dioxygenase 4
Annotated Gene Symbol(s)NCED4, CCD4
Annotation TypeHomolog
Chromosome Positionchr4:10481835-10483622 | Forward length=595
E-Value1E-72
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.5514891657134
Replicate 20.15051111409533
Replicate 30.98523602564097
Condition 2: 8 Hour
Replicate 11.8430220928034
Replicate 21.2823444783476
Replicate 32.146964697035
Condition 3: 24 Hour
Replicate 11.3988628059891
Replicate 20.23715332140406
Replicate 32.1181649696997


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_213412.p1 GENE.R_Transcript_213412~~R_Transcript_213412.p1 ORF type:complete len:279 (+),score=19.44,RPE65|PF03055.11|1.4e-38 R_Transcript_213412:195-1031(+)
ATGGATGCCTTCTCTTCTTCTTTCCTCTCACCAATACCACAACCAAATCTCCTCCTCAGCCAGACTAAGCCTTCACTTCTGCCCACTCAGTTTCGCATAGTTTCATCACAAACATCCACTACCATCCCCCATAGAGAACCCAAATCTCAAAAAATCATGAGCAATTCTAAGCCGTTTCCTTCCCTTCTTCTAGACGCTTTAGAAAATACGATCAATAACTTCATCGATCCTCCCACAAGCCCTTCAGTTGACCCGAAACTTGTCCTCTCGGGAAACTTTGCACCGGTAGAGGAGCTCCCACCTACAGAATGCGAGGTTGTTGAGGGCACCCTGCCCTCATGCCTGAATGGGGCCTACATTCGCAATGGTCCCAACCCACAGTTTTCCCAACACGGACCTTACCATTTTTTTGACGGTGATGGCATGCTTCATAGCATCCGTTTATCAAATCAAAAGGCCACTTTTTGTAGCCGCTTTATCAAGACGTACAAGTACATGGTTGAGCATGAAGCAAGGAGCAATATCATCCCCAACTTACTTGGAGGTTTCAATGGCCTCATAGGCTTCGCAGCTCGAGCTATTCTAACGGCTATTAAGAGCACTATCTGGAAGTATGATACAAGTAACGGCATTGGGTTGGCCAATACTAGCTTAGCCTTGTTTGGAAACCGACTTTATGCACTGTGTGAATCTGATCTTCCTTACCAGGTAAGCTTAACCCCGAATGGTGACATCCAAACTCTAGGCCGCTCTAACTTTGATGGAAAACTTTTTATAAGAATGACCGCTCACCCAAAGATTGATCCTGACACTGGCGAGGCATTCGCCTTCTCCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_213412.p1 GENE.R_Transcript_213412~~R_Transcript_213412.p1 ORF type:complete len:279 (+),score=19.44,RPE65|PF03055.11|1.4e-38 R_Transcript_213412:195-1031(+)
MDAFSSSFLSPIPQPNLLLSQTKPSLLPTQFRIVSSQTSTTIPHREPKSQKIMSNSKPFPSLLLDALENTINNFIDPPTSPSVDPKLVLSGNFAPVEELPPTECEVVEGTLPSCLNGAYIRNGPNPQFSQHGPYHFFDGDGMLHSIRLSNQKATFCSRFIKTYKYMVEHEARSNIIPNLLGGFNGLIGFAARAILTAIKSTIWKYDTSNGIGLANTSLALFGNRLYALCESDLPYQVSLTPNGDIQTLGRSNFDGKLFIRMTAHPKIDPDTGEAFAFS*

Click here to download the sequence:
Link to NCBI Protein BLAST