Transcript Information: R_Transcript_213412.p2


Annotated TAIR IDAT4G19170.1
Annotated Gene Namenine-cis-epoxycarotenoid dioxygenase 4
Annotated Gene Symbol(s)NCED4, CCD4
Annotation TypeHomolog
Chromosome Positionchr4:10481835-10483622 | Forward length=595
E-Value2E-54
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.6365388045705
Replicate 20.58323056711939
Replicate 31.6543754930554
Condition 2: 8 Hour
Replicate 11.7684235795233
Replicate 21.8634068200988
Replicate 32.6218993118337
Condition 3: 24 Hour
Replicate 12.6784108432321
Replicate 21.4703505927051
Replicate 31.7023770312031


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_213412.p2 GENE.R_Transcript_213412~~R_Transcript_213412.p2 ORF type:complete len:180 (+),score=15.01,RPE65|PF03055.11|1.1e-25 R_Transcript_213412:1110-1649(+)
ATGATGCAACCTTCATATTTACACGATTTTGCTATTACAAGCAAGTTTGCCATATTTCCCGACATCCAGATACAGATGGATCCCATGAAGATGATCTTAAGAGGCGGATTTCCCCTGCGAGTGGACTTAGAAAAGGTATCGAGACTTGGAGTCATTCCAAAGTATGCTAGTGATGAAAAAGACATGAGGTGGTTTGAAGTTCCAAGACTTAACTTACTTCATGCCATCAATGCATGGGATGAAGTTAACGACAACGGAACGTCCACCATCACTATGGTGGTCACCAACTCATTATCTCCGGAAAACACATTGGATCAGCTCGATCTTGTCCATGTATTAATAGAGAAGATCACAATAGATCTCAAAACGAGGTTAGTTTCAAGGGAACCATTGTCAAAAAGAAACTTGGACTTGGCCGTCATAAATCCAGCTTATGTAGGGAAGAAGAACAAGTATGTCTACGCAGGTGTTGGTGACCCGTTGCCCAAATTAAGCGGGATTCTAAAGCTGGATGTATCCATGAGCAAGGGCGACCAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_213412.p2 GENE.R_Transcript_213412~~R_Transcript_213412.p2 ORF type:complete len:180 (+),score=15.01,RPE65|PF03055.11|1.1e-25 R_Transcript_213412:1110-1649(+)
MMQPSYLHDFAITSKFAIFPDIQIQMDPMKMILRGGFPLRVDLEKVSRLGVIPKYASDEKDMRWFEVPRLNLLHAINAWDEVNDNGTSTITMVVTNSLSPENTLDQLDLVHVLIEKITIDLKTRLVSREPLSKRNLDLAVINPAYVGKKNKYVYAGVGDPLPKLSGILKLDVSMSKGDQ*

Click here to download the sequence:
Link to NCBI Protein BLAST