Transcript Information: R_Transcript_213412.p3


Annotated TAIR IDAT4G19170.1
Annotated Gene Namenine-cis-epoxycarotenoid dioxygenase 4
Annotated Gene Symbol(s)NCED4, CCD4
Annotation TypeOrtholog
Chromosome Positionchr4:10481835-10483622 | Forward length=595
E-Value2E-41
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.9440612327734
Replicate 24.1079718205801
Replicate 35.9756706772572
Condition 2: 8 Hour
Replicate 14.5245620011214
Replicate 27.0485388412433
Replicate 35.3271031168527
Condition 3: 24 Hour
Replicate 15.739451806926
Replicate 23.8356971983613
Replicate 35.4719261717243


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_213412.p3 GENE.R_Transcript_213412~~R_Transcript_213412.p3 ORF type:complete len:92 (+),score=21.47,RPE65|PF03055.11|4.1e-20 R_Transcript_213412:1668-1943(+)
ATGTTTGGGCCAGGGTGCTATGGAGGTGAGCCGTTTTTCGTGGCGAGAGATCCAGATGATCTTGGTGCTGAGGAGGATGATGGGTATCTTGTGACTTTTATACATGATGAGAAAACAAGGCAATCCAGGTTCATTGTGATGGATGCTAAGTCAAGTAGTCTTGACATTGTTGCTTCCGTGAAGCTACCTCAACGGGTGCCCTACGGTATTCATGGATTGTTTGTTAAAGACAAGGATCTTCAAACATTGTGGGACACCGACACCACTTCAAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_213412.p3 GENE.R_Transcript_213412~~R_Transcript_213412.p3 ORF type:complete len:92 (+),score=21.47,RPE65|PF03055.11|4.1e-20 R_Transcript_213412:1668-1943(+)
MFGPGCYGGEPFFVARDPDDLGAEEDDGYLVTFIHDEKTRQSRFIVMDAKSSSLDIVASVKLPQRVPYGIHGLFVKDKDLQTLWDTDTTSN*

Click here to download the sequence:
Link to NCBI Protein BLAST