Transcript Information: R_Transcript_21360.p1


Annotated TAIR IDAT1G77230.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:29016129-29017873 | Forward length=218
E-Value3.1E-50
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.9142587185781
Replicate 24.153114368059
Replicate 33.9016970630809
Condition 2: 8 Hour
Replicate 13.6325184262397
Replicate 25.0373415136737
Replicate 35.7845792086948
Condition 3: 24 Hour
Replicate 13.2796867468149
Replicate 23.8778477170246
Replicate 33.3673391825996


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_21360.p1 GENE.R_Transcript_21360~~R_Transcript_21360.p1 ORF type:3prime_partial len:182 (+),score=53.53,TPR_11|PF13414.2|1.7e-08,TPR_11|PF13414.2|4.2,TPR_2|PF07719.13|0.0072,TPR_2|PF07719.13|5,TPR_2|PF07719.13|0.75,TPR_17|PF13431.2|43,TPR_17|PF13431.2|6.8,TPR_17|PF13431.2|0.001,TPR_1|PF00515.24|1.3,TPR_1|PF00515.24|1.4,TPR_1|PF00515.24|0.26,TPR_16|PF13432.2|2.2e-05,TPR_16|PF13432.2|0.0043,TPR_12|PF13424.2|5.3e-05,TPR_12|PF13424.2|0.36 R_Transcript_21360:47-544(+)
ATGAAGATGACATGGAAGAAGAAAAGCGGGAACAAACGATTAGCTGTCTCTCAATCTCAGCTCACCAATCTTCCATTTGAAACCCAACAACTAGATGGTGATCATGAACCAACCCAAGAATCCAACTATCAAGCACCCAAATCAAATTCCGATGCTAGCCCTAAACCCAACAAAACCCTAGATTATAACAATCCCAATCTTTCGGATGCTACTCTCGCTGATGCTTTCCTTCAACAGGGAAACAAACTTGCTGAGGATGGTAAATACCGCGAAGCACTTGGGAAGTGGGAGGCTGCTATTACTTTGATGCCTGAAAAGGCTGTTTCGCATGAACAGAAGGCTCAAGCACTACTTGAAATTGGGGATGCTTGGGGTGCTTTGAAGGCAGCAACTCGTGCCACTGAATTAGATCCGTCATGGGCTGAGGCTTTGACTACCCTTGGTAGGGCACAACTGAATTTTGGAGAGCCTGATAGTGCTATTGAAAGCTTTGACAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_21360.p1 GENE.R_Transcript_21360~~R_Transcript_21360.p1 ORF type:3prime_partial len:182 (+),score=53.53,TPR_11|PF13414.2|1.7e-08,TPR_11|PF13414.2|4.2,TPR_2|PF07719.13|0.0072,TPR_2|PF07719.13|5,TPR_2|PF07719.13|0.75,TPR_17|PF13431.2|43,TPR_17|PF13431.2|6.8,TPR_17|PF13431.2|0.001,TPR_1|PF00515.24|1.3,TPR_1|PF00515.24|1.4,TPR_1|PF00515.24|0.26,TPR_16|PF13432.2|2.2e-05,TPR_16|PF13432.2|0.0043,TPR_12|PF13424.2|5.3e-05,TPR_12|PF13424.2|0.36 R_Transcript_21360:47-544(+)
MKMTWKKKSGNKRLAVSQSQLTNLPFETQQLDGDHEPTQESNYQAPKSNSDASPKPNKTLDYNNPNLSDATLADAFLQQGNKLAEDGKYREALGKWEAAITLMPEKAVSHEQKAQALLEIGDAWGALKAATRATELDPSWAEALTTLGRAQLNFGEPDSAIESFDK

Click here to download the sequence:
Link to NCBI Protein BLAST