Transcript Information: R_Transcript_213820.p3


Annotated TAIR IDAT5G39790.1
Annotated Gene Name5'-AMP-activated protein kinase-related
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:15932884-15935121 | Reverse length=273
E-Value1.2E-38
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.9372580846674
Replicate 26.0334196598558
Replicate 310.531833377541
Condition 2: 8 Hour
Replicate 19.2877418765413
Replicate 212.337038257206
Replicate 38.3455681013273
Condition 3: 24 Hour
Replicate 18.1803680926302
Replicate 29.3798227465673
Replicate 310.818060937202


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_213820.p3 GENE.R_Transcript_213820~~R_Transcript_213820.p3 ORF type:complete len:87 (+),score=18.83,AMPK1_CBM|PF16561.1|3.6e-14 R_Transcript_213820:568-828(+)
ATGGAGAAAATGGGGCTTCCTGCTTCTTCCTCCCAACATAGGCAGAGTGTACAAGTGATGGGTAGCTTTGATGGATGGAGTCAAGGAGAGCACTTATCCCCGGAGTACACGGGTTCGTACACCAAATTCTCGTCAACATTGTTGCTTCGACCTGGACGGTATGAGATCAAATTCTTGGTGGATGGGGAGTGGCAGATATCACCAGAATTCCCTATAGTTGGCGGGGGCCTTATGAAAAATAATCTACTGGTTGTTGAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_213820.p3 GENE.R_Transcript_213820~~R_Transcript_213820.p3 ORF type:complete len:87 (+),score=18.83,AMPK1_CBM|PF16561.1|3.6e-14 R_Transcript_213820:568-828(+)
MEKMGLPASSSQHRQSVQVMGSFDGWSQGEHLSPEYTGSYTKFSSTLLLRPGRYEIKFLVDGEWQISPEFPIVGGGLMKNNLLVVE*

Click here to download the sequence:
Link to NCBI Protein BLAST