Transcript Information: R_Transcript_213825.p1


Annotated TAIR IDAT5G39790.1
Annotated Gene Name5'-AMP-activated protein kinase-related
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:15932884-15935121 | Reverse length=273
E-Value1.2E-100
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.951776572831
Replicate 212.667767917833
Replicate 311.835147758012
Condition 2: 8 Hour
Replicate 110.447302377491
Replicate 212.298485012652
Replicate 312.706127434271
Condition 3: 24 Hour
Replicate 112.856372047514
Replicate 212.350944978723
Replicate 39.2657949841199


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_213825.p1 GENE.R_Transcript_213825~~R_Transcript_213825.p1 ORF type:complete len:300 (+),score=70.50,AMPK1_CBM|PF16561.1|1.6e-14 R_Transcript_213825:213-1112(+)
ATGGGGAGCCACGCTGTTGGTCTTGTGAGGTGCTGGCCAGATGATCAGGTTTTGTGCCGGCAGACTTTTGTTATATCAAATTTCAATAGCCTTTGTCATATCCGCTATAATGTGGCACCAAGAACCATGCGAGCTTGTTCAAACAACTTTTCTCATCTTCTTCAAGCCTCAACTGAGAAGCATCCATCTTGCAGTCAATTCTGCTGCATTTATTCTGTACCGGTTGACTTGGAGGAGCAGTCACTGTCAGGATCTCCAGACATCCAGGATGATGAAACTGATTTGTTGGATCCAGCCAAAAAACTTGATAAGCCACTTAGCAGTGATCAGTTGAAGTCATTGCTTGCAGATTCTGAAAGGGCAAAGCTTGTCAAGAAACTCTGTGAAGCAAATCAACAGAACCGGTTTCTGAAACGACAGTTACAAGGGAAAGAAGATGCACTGATCAATTTCAAGAGTGAACTTGCTGTTTTGGAACAAGAGATTCAGGCACTTGTTGCACTTGCAGATGAAATTGCTAAAGCAGGCATTCCAGAAGGTTCCAGAAAGATTAATGGAAAGTACATCCATACCCATCTACTTTCCCGATTAGAAGCTGTACAACAAAAATTAATGGACCAGATAAAGGACGTGGACGCAGCGCAGTCCAAGGAGGTGGCTGTATTCTGGGTTGGCATGGCTGAGAGTGTACAAGTGATGGGTAGCTTTGATGGATGGAGTCAAGGAGAGCACTTATCCCCGGAGTACACGGGTTCGTACACCAAATTCTCGTCAACATTGTTGCTTCGACCTGGACGGTATGAGATCAAATTCTTGGTGGATGGGGAGTGGCAGATATCACCAGAATTCCCTATAGTTGGCGGGGGCCTTATGAAAAATAATCTACTGGTTGTTGAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_213825.p1 GENE.R_Transcript_213825~~R_Transcript_213825.p1 ORF type:complete len:300 (+),score=70.50,AMPK1_CBM|PF16561.1|1.6e-14 R_Transcript_213825:213-1112(+)
MGSHAVGLVRCWPDDQVLCRQTFVISNFNSLCHIRYNVAPRTMRACSNNFSHLLQASTEKHPSCSQFCCIYSVPVDLEEQSLSGSPDIQDDETDLLDPAKKLDKPLSSDQLKSLLADSERAKLVKKLCEANQQNRFLKRQLQGKEDALINFKSELAVLEQEIQALVALADEIAKAGIPEGSRKINGKYIHTHLLSRLEAVQQKLMDQIKDVDAAQSKEVAVFWVGMAESVQVMGSFDGWSQGEHLSPEYTGSYTKFSSTLLLRPGRYEIKFLVDGEWQISPEFPIVGGGLMKNNLLVVE*

Click here to download the sequence:
Link to NCBI Protein BLAST