Transcript Information: R_Transcript_213827.p1


Annotated TAIR IDAT5G39790.1
Annotated Gene Name5'-AMP-activated protein kinase-related
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:15932884-15935121 | Reverse length=273
E-Value2E-43
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1267259848592
Replicate 20
Replicate 30.65986486902497
Condition 2: 8 Hour
Replicate 10
Replicate 21.1962611684585
Replicate 30.74697986092127
Condition 3: 24 Hour
Replicate 11.3226720213492
Replicate 20
Replicate 30.36029143517527


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_213827.p1 GENE.R_Transcript_213827~~R_Transcript_213827.p1 ORF type:complete len:243 (+),score=60.87 R_Transcript_213827:213-941(+)
ATGGGGAGCCACGCTGTTGGTCTTGTGAGGTGCTGGCCAGATGATCAGGTTTTGTGCCGGCAGACTTTTGTTATATCAAATTTCAATAGCCTTTGTCATATCCGCTATAATGTGGCACCAAGAACCATGCGAGCTTGTTCAAACAACTTTTCTCATCTTCTTCAAGCCTCAACTGAGAAGCATCCATCTTGCAGTCAATTCTGCTGCATTTATTCTGTACCGGTTGACTTGGAGGAGCAGTCACTGTCAGGATCTCCAGACATCCAGGATGATGAAACTGATTTGTTGGATCCAGCCAAAAAACTTGATAAGCCACTTAGCAGTGATCAGTTGAAGTCATTGCTTGCAGATTCTGAAAGGGCAAAGCTTGTCAAGAAACTCTGTGAAGCAAATCAACAGAACCGGTTTCTGAAACGACAGTTACAAGGGAAAGAAGATGCACTGATCAATTTCAAGAGTGAACTTGCTGTTTTGGAACAAGAGATTCAGGCACTTGTTGCACTTGCAGATGAAATTGCTAAAGCAGGCATTCCAGAAGGTTCCAGAAAGATTAATGGAAAGTACATCCATACCCATCTACTTTCCCGATTAGAAGCTGTACAACAAAAATTAATGGACCAGATAAAGGACGTGGACGCAGCGCAGTCCAAGGAGGTGGCTGTATTCTGGGTTGGCATGGCTGAGGAGGCACATGGGCCAGTTACAAATACAATATACAACATGAGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_213827.p1 GENE.R_Transcript_213827~~R_Transcript_213827.p1 ORF type:complete len:243 (+),score=60.87 R_Transcript_213827:213-941(+)
MGSHAVGLVRCWPDDQVLCRQTFVISNFNSLCHIRYNVAPRTMRACSNNFSHLLQASTEKHPSCSQFCCIYSVPVDLEEQSLSGSPDIQDDETDLLDPAKKLDKPLSSDQLKSLLADSERAKLVKKLCEANQQNRFLKRQLQGKEDALINFKSELAVLEQEIQALVALADEIAKAGIPEGSRKINGKYIHTHLLSRLEAVQQKLMDQIKDVDAAQSKEVAVFWVGMAEEAHGPVTNTIYNMR*

Click here to download the sequence:
Link to NCBI Protein BLAST