Transcript Information: R_Transcript_21398.p1


Annotated TAIR IDAT5G27030.2
Annotated Gene NameTOPLESS-related 3
Annotated Gene Symbol(s)TPR3
Annotation TypeOrtholog
Chromosome Positionchr5:9508913-9515263 | Reverse length=1134
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 132.042243275965
Replicate 221.397138878791
Replicate 327.883746946589
Condition 2: 8 Hour
Replicate 141.737269796441
Replicate 251.592652829936
Replicate 356.484511957804
Condition 3: 24 Hour
Replicate 143.515480063421
Replicate 233.403692101547
Replicate 340.571845324167


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_21398.p1 GENE.R_Transcript_21398~~R_Transcript_21398.p1 ORF type:complete len:1100 (+),score=230.28,WD40|PF00400.28|1.1e+03,WD40|PF00400.28|1.3e+03,WD40|PF00400.28|0.001,WD40|PF00400.28|25,WD40|PF00400.28|1.6e+03,WD40|PF00400.28|2.1,WD40|PF00400.28|1.3e+03,WD40|PF00400.28|6.5e+03,WD40|PF00400.28|94,WD40|PF00400.28|0.6,WD40|PF00400.28|4.2e+02 R_Transcript_21398:969-4268(+)
ATGTCGTCCTTAAGCAGGGAATTGGTGTTTCTCATACTTCAATTCCTCGAAGAAGAGAAGTTTAAAGATTCTGTTCACAGGCTGGAGCAAGAATCAGGGTTTTTCTTCAACATGAGGTATTTTGAGGAGAAAGTGCAGGCAGGAGAATGGGATGAAGTGGAAAAGTACCTATCTGGATTTACCAAAGTGGATGACAATAGATATTCTATGAAGATATTCTTTGAAATAAGGAAGCAGAAGTATCTTGAAGCTCTGGATAAGCAAGATAAGGCTAAAGCGGTCGAGATACTAGTCACTGACTTGAAAGTGTTCTCAACATTCAATGAAGAGCTTTACAAGGAAATTACTCAGCTTCTGACCCTTAACAATTTCAGGGAAAATGAGCAGCTCTCAAAGTATGGGGACACCAAAACAGCTCGCAACATCATGTTGGTAGAACTTAGAAAGCTGATAGAAGCGAACCCACTTTTCCGTGACAAGCTTGTGTTTCCTACTTTAAGGTCGTCAAGACTGCGTACTCTTATCAATCAAAGCTTAAATTGGCAGCATCAGCTGTGTAAAAATCCTAGACCAAACCCAGACATAAAGACATTGTTCACCGATCACACCTGCACGCCACCAAATGGTGCTGTTGCCCCTACACCTGTGACTCTTCCAGTTGCTGCTGTTGCGAAACCTGCTGCCTATACACCGCTTGGAGCTCATGGTCCCTTTCAACCAGCAGCTGCTGCAGCTAGTGCTACTGCTCTGGCTGGTTGGATGAATGCTGCTGCATCGTCGTCGGTTCAAGCAGCTGTTGTGACTGCATCTTCCATTCCTGTACCCCCAAATCAAGTTCCGATTGCTAAACGTCCCAGAACACCTCCTGCAACACTTGGCATGCTTGATTATAAGAATCCTGAGCATGAACAGCTGATGAAACGTTTGCGCCCTGCTCAATCTGTTGAGGAGGTTACATATCCAACACCTCGCCATCAACCTTCTTGGTCACTGGAGGATTTACCAAGAACTGTGGCTTTTACCTTGCATCAAGGCTCTTCTGTTGTGAGCATGGATTTCCATCCTTCTCATCACACCTTGCTTCTTGTTGGTTCTTCTAGCGCTGAGATTACACTTTGGGATGTTGGATCACGTGAGAAAATGGTCTCAAAGCCATTCAAAATTTGGGACATGGCCTCGTGTACTTTACAATTCCAGGCTGCCTTTGTTAAAGATGTGATATCAGTCAGCCGTGTAGCATGGAGCCCAGATGGAAATTACGTGGGTGCCGCATTCACCAAGCACCTGATCCACTTGTATGTATATTCTGGACCCAATGATCTTCGGCAACATCTTGAGATTGATGCCCATGCTGGTAGTGTAAATGATCTGGCTTTTGCTTACCCAAACAAGCAACTGTGTGTTCTAACATGTGGAGATGATAAGCTGATTAAGGTATGGGATTTATCAGGAAGAAAACTATATAATCTTGAGGGCCATGAAGCACCTGTATATTCCGTATGCCCTCATCACAAGGAGAACATCCAGTTTATCTTCTCAACTGCGATTGATGGGAAGATTAAGGCTTGGCTGTATGATAATATGGGCTCTAAAGTAGATTATGATGCTCCTGGACACTGGTGTACTACAATGCTTTACAGTGCCGATGGTAGTAGATTATTTTCATGCGGAACTAGTAAAGAGGGAGAATCTTACCTGGTTGAATGGAATGAAAGTGAAGGGGCAATAAAGAGGACATATGCTGGATTCCGGAGAAAATCAAATGGTGTTGTGCAATTTGACACCACACAGAATCACTTTTTGGCAGCAGGGGAGGATCATCAGATAAAGTTTTGGGACATGGATAATGTCAATGTTCTTACTCATACAGATGCAGAAGGGGGTCTTGCGAGTCTGCCTTGCTTAAGATTCAACAAGGACGGGAATCTTCTTGCTGTCTCAACTGCAGATAATGGCTTCAAAATACTTGCAAATGCTGCTGGACTCAGATCATTGAGAACAGTGGAAGCTCCATCTTTTGAAGCACTGAGGCCACCTATCGAAGCTGCTGCAATCAAGAATGGAGTTGATACAATGCCAAGAAGCATGGAAAAGCCTAGGCCATTGGAAGACACAACTGAAAAAATCAAACCTTGGCAGCTGGTTGAAGTTGTGGAACCTGTCCAGTGCAGGCTAGTGACTTTACCAGAAAGCTCAGACAGTTCCAATAAGGTTGCCCGACTTCTCTACACCAATAATGGTGTTGGAATTTTGGCGCTTGGGTCTAATGGTGTCCAGAAGTTATGGAAATGGAGTAGAAATGAACAAAACCCTAGTGGAAAGGCCACTGCCAATGTAGTTCCTCAGCATTGGCAACCAAACAGTGGTCTTCTTATGGCTAATGATGTCTCAGGTGTCAACCCTGAAGAAGCTGTACCATGCATAGCTCTTTCCAAGAACGACTCTTATGTAATGTCAGCTGCTGGCGGAAAGGTGTCATTGTTCAACATGATGACATTCAAGGTCATGACAACGTTCATGCCCCCTCCACCTGCGTCCACATTCTTGGCGTTCCATCCCGTTGACAACAACATCTTAGCCATTGGAATGGAGGATTCAACAATTCACATCTACAATGTTAGAGTAGATGAGGTAAGATCAAAATTGAAAGGCCATGTTAAGCGTATCAGTGGCCTAGCCTTTTCGAACGCTCTTAGCATCCTTGTTTCATCTGGTGCTGATGCTCAACTCTGTGTCTGGAACATTGATACCTGGGAAAAGAGATCAGTCACAATCCAGCTTCCTGCTGGAAAGGCTGCTACGGGTGATACTCGTGTACAGTTTCACTCAGATCAAACTCGATTGCTGGTGTTTCATGAAACACAGCTTGCAATATATGATGCTTCTAAAATGGAATGCATCCGACAGTGGGTGCCTCAAGATCCGCTGTCTGCACCAGTATCCTATGCAGCATACTCATGCAACAGTCTGATAATATATGCTACCTTTTGTGATGGAAACATCGGAGTTTTTGATGCTGAGACCTTGAAGCTCAGATGCCGCATTGCTCCATCAGCTTACTTATCGCAGGCTCAGTTGAATGGGAACCAACCTGTATATCCACTAGTGGTAGCGGCCCACCCACAGGAGGCGAACCAGTTGGCCGTTGGTTTGAGTGATGGAACTGTAAAAGTGATAGAGCCCATAGAAGCAGAAGGCAAGTGGGGAGTATCTCCGCCTGTCGACAATGGGATGATAAATGGTAGGACGGCCTCATCATCTGCCACAAGCAGCCATACACCCGATCTGATTCAAAGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_21398.p1 GENE.R_Transcript_21398~~R_Transcript_21398.p1 ORF type:complete len:1100 (+),score=230.28,WD40|PF00400.28|1.1e+03,WD40|PF00400.28|1.3e+03,WD40|PF00400.28|0.001,WD40|PF00400.28|25,WD40|PF00400.28|1.6e+03,WD40|PF00400.28|2.1,WD40|PF00400.28|1.3e+03,WD40|PF00400.28|6.5e+03,WD40|PF00400.28|94,WD40|PF00400.28|0.6,WD40|PF00400.28|4.2e+02 R_Transcript_21398:969-4268(+)
MSSLSRELVFLILQFLEEEKFKDSVHRLEQESGFFFNMRYFEEKVQAGEWDEVEKYLSGFTKVDDNRYSMKIFFEIRKQKYLEALDKQDKAKAVEILVTDLKVFSTFNEELYKEITQLLTLNNFRENEQLSKYGDTKTARNIMLVELRKLIEANPLFRDKLVFPTLRSSRLRTLINQSLNWQHQLCKNPRPNPDIKTLFTDHTCTPPNGAVAPTPVTLPVAAVAKPAAYTPLGAHGPFQPAAAAASATALAGWMNAAASSSVQAAVVTASSIPVPPNQVPIAKRPRTPPATLGMLDYKNPEHEQLMKRLRPAQSVEEVTYPTPRHQPSWSLEDLPRTVAFTLHQGSSVVSMDFHPSHHTLLLVGSSSAEITLWDVGSREKMVSKPFKIWDMASCTLQFQAAFVKDVISVSRVAWSPDGNYVGAAFTKHLIHLYVYSGPNDLRQHLEIDAHAGSVNDLAFAYPNKQLCVLTCGDDKLIKVWDLSGRKLYNLEGHEAPVYSVCPHHKENIQFIFSTAIDGKIKAWLYDNMGSKVDYDAPGHWCTTMLYSADGSRLFSCGTSKEGESYLVEWNESEGAIKRTYAGFRRKSNGVVQFDTTQNHFLAAGEDHQIKFWDMDNVNVLTHTDAEGGLASLPCLRFNKDGNLLAVSTADNGFKILANAAGLRSLRTVEAPSFEALRPPIEAAAIKNGVDTMPRSMEKPRPLEDTTEKIKPWQLVEVVEPVQCRLVTLPESSDSSNKVARLLYTNNGVGILALGSNGVQKLWKWSRNEQNPSGKATANVVPQHWQPNSGLLMANDVSGVNPEEAVPCIALSKNDSYVMSAAGGKVSLFNMMTFKVMTTFMPPPPASTFLAFHPVDNNILAIGMEDSTIHIYNVRVDEVRSKLKGHVKRISGLAFSNALSILVSSGADAQLCVWNIDTWEKRSVTIQLPAGKAATGDTRVQFHSDQTRLLVFHETQLAIYDASKMECIRQWVPQDPLSAPVSYAAYSCNSLIIYATFCDGNIGVFDAETLKLRCRIAPSAYLSQAQLNGNQPVYPLVVAAHPQEANQLAVGLSDGTVKVIEPIEAEGKWGVSPPVDNGMINGRTASSSATSSHTPDLIQR*

Click here to download the sequence:
Link to NCBI Protein BLAST