Transcript Information: R_Transcript_214010.p1


Annotated TAIR IDAT1G12775.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:4353906-4355840 | Forward length=644
E-Value8E-28
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.16745835738274
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_214010.p1 GENE.R_Transcript_214010~~R_Transcript_214010.p1 ORF type:internal len:109 (+),score=29.35,PPR_2|PF13041.2|1e-17,PPR_2|PF13041.2|2.1e-20,PPR_2|PF13041.2|4.6e-08,PPR_1|PF12854.3|5.5e-11,PPR_1|PF12854.3|8e-13,PPR_1|PF12854.3|8.8e-14,PPR|PF01535.16|4.1e-09,PPR|PF01535.16|1.8e-10,PPR|PF01535.16|6.5e-07,PPR_3|PF13812.2|1.6e-05,PPR_3|PF13812.2|1.2e-06,PPR_3|PF13812.2|0.00031,ATP13|PF12921.3|3.6e+02,ATP13|PF12921.3|0.3,ATP13|PF12921.3|0.17 R_Transcript_214010:3-326(+)
CTGGACAACAACATAGCTCCAGCTGTTGATACTTTCAACACCATGATTGACATGCTCTGTAAAGAAGGAAGGGTGGATGAAGCACATGGCATCCTAGATTACATGCTTGAGAGAGGTGAAACTCCAGACATAATTACTTACAATGCTCTGTTGGATGGATATTGCTTGTGTGGCAGAATGGATGAGGCATTACAACTAATGGATTTCATGGTGGAAAAGGGCTGCCATCCTAATGTTGTGACTTTAAACTCCTTGATCAATGGATATTGCAAGGCTCAAAACATTGATGCAGCTCTCAGCCTGTTTCAAGAAATTTCTCTTGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_214010.p1 GENE.R_Transcript_214010~~R_Transcript_214010.p1 ORF type:internal len:109 (+),score=29.35,PPR_2|PF13041.2|1e-17,PPR_2|PF13041.2|2.1e-20,PPR_2|PF13041.2|4.6e-08,PPR_1|PF12854.3|5.5e-11,PPR_1|PF12854.3|8e-13,PPR_1|PF12854.3|8.8e-14,PPR|PF01535.16|4.1e-09,PPR|PF01535.16|1.8e-10,PPR|PF01535.16|6.5e-07,PPR_3|PF13812.2|1.6e-05,PPR_3|PF13812.2|1.2e-06,PPR_3|PF13812.2|0.00031,ATP13|PF12921.3|3.6e+02,ATP13|PF12921.3|0.3,ATP13|PF12921.3|0.17 R_Transcript_214010:3-326(+)
LDNNIAPAVDTFNTMIDMLCKEGRVDEAHGILDYMLERGETPDIITYNALLDGYCLCGRMDEALQLMDFMVEKGCHPNVVTLNSLINGYCKAQNIDAALSLFQEISLE

Click here to download the sequence:
Link to NCBI Protein BLAST