Transcript Information: R_Transcript_214012.p1


Annotated TAIR IDAT1G12775.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:4353906-4355840 | Forward length=644
E-Value4E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.18817485520329
Replicate 20
Replicate 30.23615193398095
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.47335685005576
Replicate 20.68212140898693
Replicate 30.45129288014221


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_214012.p1 GENE.R_Transcript_214012~~R_Transcript_214012.p1 ORF type:internal len:97 (+),score=26.51,PPR_2|PF13041.2|1.6e-14,PPR_2|PF13041.2|2.9e-21,PPR_2|PF13041.2|4.4e-09,PPR_1|PF12854.3|3.2e-07,PPR_1|PF12854.3|4.7e-12,PPR_1|PF12854.3|3.4e-15,PPR|PF01535.16|5.2e-06,PPR|PF01535.16|7e-10,PPR|PF01535.16|5.4e-08,PPR_3|PF13812.2|0.0023,PPR_3|PF13812.2|2.2e-06,PPR_3|PF13812.2|8.1e-05 R_Transcript_214012:3-290(+)
AACACCATGATTGACATGCACTGTAAAGAAGGGAGGGTGGATGAAGCACATGCCATCCTAGAATACATGCTAGACAGAGCTGAGACTCCAGACATAATTACTTACAACTCTCTGCTGGATGGATATTGCTTGTGTGGCAGAATGGATGAGGCGTCTCAGCTTATGAATTTCATGGTGGAAAAGGGATGCCAGCCTGATGTTGTGACTTTCAACTCCTTGATCAATGGATATTGCAAGGCTCAAAACATTGATGCAGCTCTCAGCCTGTTTCAAGAAATTTCTCTTGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_214012.p1 GENE.R_Transcript_214012~~R_Transcript_214012.p1 ORF type:internal len:97 (+),score=26.51,PPR_2|PF13041.2|1.6e-14,PPR_2|PF13041.2|2.9e-21,PPR_2|PF13041.2|4.4e-09,PPR_1|PF12854.3|3.2e-07,PPR_1|PF12854.3|4.7e-12,PPR_1|PF12854.3|3.4e-15,PPR|PF01535.16|5.2e-06,PPR|PF01535.16|7e-10,PPR|PF01535.16|5.4e-08,PPR_3|PF13812.2|0.0023,PPR_3|PF13812.2|2.2e-06,PPR_3|PF13812.2|8.1e-05 R_Transcript_214012:3-290(+)
NTMIDMHCKEGRVDEAHAILEYMLDRAETPDIITYNSLLDGYCLCGRMDEASQLMNFMVEKGCQPDVVTFNSLINGYCKAQNIDAALSLFQEISLE

Click here to download the sequence:
Link to NCBI Protein BLAST