Transcript Information: R_Transcript_214317.p1


Annotated TAIR IDAT1G18210.1
Annotated Gene NameCalcium-binding EF-hand family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:6268273-6268785 | Reverse length=170
E-Value3.7E-56
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 138.837797978542
Replicate 236.165433756707
Replicate 337.437883912654
Condition 2: 8 Hour
Replicate 123.946528714927
Replicate 233.492069718075
Replicate 346.218638495963
Condition 3: 24 Hour
Replicate 134.790685842864
Replicate 237.892295010243
Replicate 338.665064226634


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_214317.p1 GENE.R_Transcript_214317~~R_Transcript_214317.p1 ORF type:complete len:227 (+),score=12.45,EF-hand_1|PF00036.28|3.4e-07,EF-hand_1|PF00036.28|3.8e-07,EF-hand_1|PF00036.28|2.4e-06,EF-hand_1|PF00036.28|5.5e-07,EF-hand_6|PF13405.2|6.7e-07,EF-hand_6|PF13405.2|0.029,EF-hand_6|PF13405.2|9.4e-07,EF-hand_6|PF13405.2|0.0086,EF-hand_7|PF13499.2|9.6e-13,EF-hand_7|PF13499.2|1.8e-10,EF-hand_5|PF13202.2|2.9e-07,EF-hand_5|PF13202.2|0.0045,EF-hand_5|PF13202.2|1.5e+03,EF-hand_5|PF13202.2|0.0029,EF-hand_5|PF13202.2|4.3e-05,EF-hand_8|PF13833.2|0.018,EF-hand_8|PF13833.2|0.00023,EF-hand_8|PF13833.2|1.6e-08,SPARC_Ca_bdg|PF10591.5|3e-05,SPARC_Ca_bdg|PF10591.5|0.0052,EF-hand_9|PF14658.2|0.0027,EF-hand_9|PF14658.2|0.18,EF-hand_4|PF12763.3|6.4e+02,EF-hand_4|PF12763.3|0.0059,EF-hand_4|PF12763.3|4.3 R_Transcript_214317:187-867(+)
ATGCCACGCGTCTTCTTCCCATTAAAAATCCAAACCTCCAAATTCTCAATCTCAACCCACCTCCTTTTCTCTCTCTTTATTTCTCCCTCTTCAAAAAAAATCTCCTCACAAATCCCAAACCCTTTCTCTCTAACCTTCAAGTCTTCAACAATGGCGACAGTAGAGAACCAGGCCAACGGAAGCAGCCACAACAGCAGCAACTCATCACGATCTCGCAACCCAATGTACCTCTCGGACCTAACAGAAGTCAAGAAAGTGTTCGACCGTTTCGACACTAACGGCGACGGGAAGATCTCCGGCTCGGAGCTCGCCGGCGTGTTAACGGCGTTAGGATCGGAGACGAATCAAGAGGAAGTAGACCGGATGATGGAGGAGATGGACTCGGACAAGGACGGATTCGTGAACCTGGAGGAGTTCGCCGAGTTCTGTAGCCGGAAAGTCGACGACGACGAGTCAGGGTCGAGAGAGCTCCGTGACGCGTTCGAGATGTACGATCAGGACAAGAACGGACTGATTTCGGCGTCCGAGTTGCACCTGGTGCTGAGTCGACTCGGTGAGAGGTGTACGGTCGAAGATTGTGGAAGGATGATCCAGTCTGTTGATGCTGATGGTGATGGTAATGTCAGTTTCGATGAGTTTCGCAAGATGATGACTAACCCCAAAACGACGTCGTCGTCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_214317.p1 GENE.R_Transcript_214317~~R_Transcript_214317.p1 ORF type:complete len:227 (+),score=12.45,EF-hand_1|PF00036.28|3.4e-07,EF-hand_1|PF00036.28|3.8e-07,EF-hand_1|PF00036.28|2.4e-06,EF-hand_1|PF00036.28|5.5e-07,EF-hand_6|PF13405.2|6.7e-07,EF-hand_6|PF13405.2|0.029,EF-hand_6|PF13405.2|9.4e-07,EF-hand_6|PF13405.2|0.0086,EF-hand_7|PF13499.2|9.6e-13,EF-hand_7|PF13499.2|1.8e-10,EF-hand_5|PF13202.2|2.9e-07,EF-hand_5|PF13202.2|0.0045,EF-hand_5|PF13202.2|1.5e+03,EF-hand_5|PF13202.2|0.0029,EF-hand_5|PF13202.2|4.3e-05,EF-hand_8|PF13833.2|0.018,EF-hand_8|PF13833.2|0.00023,EF-hand_8|PF13833.2|1.6e-08,SPARC_Ca_bdg|PF10591.5|3e-05,SPARC_Ca_bdg|PF10591.5|0.0052,EF-hand_9|PF14658.2|0.0027,EF-hand_9|PF14658.2|0.18,EF-hand_4|PF12763.3|6.4e+02,EF-hand_4|PF12763.3|0.0059,EF-hand_4|PF12763.3|4.3 R_Transcript_214317:187-867(+)
MPRVFFPLKIQTSKFSISTHLLFSLFISPSSKKISSQIPNPFSLTFKSSTMATVENQANGSSHNSSNSSRSRNPMYLSDLTEVKKVFDRFDTNGDGKISGSELAGVLTALGSETNQEEVDRMMEEMDSDKDGFVNLEEFAEFCSRKVDDDESGSRELRDAFEMYDQDKNGLISASELHLVLSRLGERCTVEDCGRMIQSVDADGDGNVSFDEFRKMMTNPKTTSSS*

Click here to download the sequence:
Link to NCBI Protein BLAST