Transcript Information: R_Transcript_214625.p1


Annotated TAIR IDAT1G30700.1
Annotated Gene NameFAD-binding Berberine family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:10892623-10894437 | Forward length=527
E-Value1E-58
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.5781480845386
Replicate 20.47502942118321
Replicate 30.62190237817608
Condition 2: 8 Hour
Replicate 10.33238730697618
Replicate 20.30354138245953
Replicate 30.7392058623687
Condition 3: 24 Hour
Replicate 10.51940740334172
Replicate 20.59878530924644
Replicate 30.5942363263411


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_214625.p1 GENE.R_Transcript_214625~~R_Transcript_214625.p1 ORF type:5prime_partial len:221 (+),score=21.23,BBE|PF08031.8|1.8e-20 R_Transcript_214625:1-663(+)
GATTGTTTCGAAATGAGTTGGGCTGAATCTGTGTTGTTTTGGTCTAATTACAACATTGGAACACCAGTCAATGTGTTATTGAATCGAACATATGATGCAAATTATCTTAAGAGGAAATCAGACTATGTAACAGAACCAATATCCAAAGATGGGTTGGAGCTTCTATGGAAGAAGTTGGTTGAGCTTGGCAAACCTGGGTTAGTCTTCAATTCGTATGGTGGGAAGATGAAAGAAATTCAAACGACCGATACCCCATTTCCTCATCGAAATGGGATCTTTTACAAGATTCAGTATTCCATCAATTGGAACGAACCAGGGCACGAAGAAGACAACACAAATCTCGCGTTGATAAGACAGTTATACGATTTCATGACTCCATATGTGTCGAAATCCCCAAGACGGGCATACCTTAACTATAGGGATATTGATATTGGTGTCAATGATCACAACTTCAGCTATGAAGCAAGCAAGGTTTTTGGTCAGAAATATTTTGCAGGTAATTTTGACAGATTAGTGCAGATTAAGTCTAAAGTAGACCCAGATAATTTCTTCAAATATGAGCAAAGCATCACACCTCTCACGTCTTCTTCATGGCAGAAAAAAAGGTTGGTTTACATTATCTACTTTGTCAATGCTTTTGGTACTTGGTTTTTCTTGTGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_214625.p1 GENE.R_Transcript_214625~~R_Transcript_214625.p1 ORF type:5prime_partial len:221 (+),score=21.23,BBE|PF08031.8|1.8e-20 R_Transcript_214625:1-663(+)
DCFEMSWAESVLFWSNYNIGTPVNVLLNRTYDANYLKRKSDYVTEPISKDGLELLWKKLVELGKPGLVFNSYGGKMKEIQTTDTPFPHRNGIFYKIQYSINWNEPGHEEDNTNLALIRQLYDFMTPYVSKSPRRAYLNYRDIDIGVNDHNFSYEASKVFGQKYFAGNFDRLVQIKSKVDPDNFFKYEQSITPLTSSSWQKKRLVYIIYFVNAFGTWFFLW*

Click here to download the sequence:
Link to NCBI Protein BLAST