Transcript Information: R_Transcript_214992.p1


Annotated TAIR IDAT5G01110.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:42114-44303 | Reverse length=729
E-Value5.1E-44
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.34117684027512
Replicate 20.19622710669437
Replicate 30.42816331955425
Condition 2: 8 Hour
Replicate 10.22883985932005
Replicate 20.41796040824646
Replicate 30
Condition 3: 24 Hour
Replicate 10.21455894605331
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_214992.p1 GENE.R_Transcript_214992~~R_Transcript_214992.p1 ORF type:internal len:107 (+),score=9.23,PPR_2|PF13041.2|0.0024,PPR_2|PF13041.2|4.7e-13,PPR_2|PF13041.2|6.9e-16,PPR_1|PF12854.3|7.9e-05,PPR_1|PF12854.3|2e-09,PPR_1|PF12854.3|0.00025,PPR|PF01535.16|5.6e+03,PPR|PF01535.16|3e-05,PPR|PF01535.16|5.3e-08,PPR|PF01535.16|0.97,PPR_3|PF13812.2|1.1e+04,PPR_3|PF13812.2|0.17,PPR_3|PF13812.2|8e-05,PPR_3|PF13812.2|17 R_Transcript_214992:2-319(+)
GTTGGGTGGGTTGATTTAACATGGGAGGTGTATGGAGAGGTTGTTAAGTATGGCGGTTGGGTGAACGTTTACACAGTTAATATCATGGTTAATGCATTGTGTAAGGATGGTAAGATAGCAAAAGTGGGTTCGTTTTTGTTGGAAATGGAAGCAAAGGGAGTGTTTCCCGACAATGTGACTTATAGTACATTGATTAATGCATATCTCCGAGAGGGGAATGTGCAAAAAGGTTTTGAATTGATGAGGTTGATGTCGAGTAAAGGGTTGAGGCCGGGGCTGTTCACTTATAATTCGGTGTTAAAAGGGCTGTGTAGGGTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_214992.p1 GENE.R_Transcript_214992~~R_Transcript_214992.p1 ORF type:internal len:107 (+),score=9.23,PPR_2|PF13041.2|0.0024,PPR_2|PF13041.2|4.7e-13,PPR_2|PF13041.2|6.9e-16,PPR_1|PF12854.3|7.9e-05,PPR_1|PF12854.3|2e-09,PPR_1|PF12854.3|0.00025,PPR|PF01535.16|5.6e+03,PPR|PF01535.16|3e-05,PPR|PF01535.16|5.3e-08,PPR|PF01535.16|0.97,PPR_3|PF13812.2|1.1e+04,PPR_3|PF13812.2|0.17,PPR_3|PF13812.2|8e-05,PPR_3|PF13812.2|17 R_Transcript_214992:2-319(+)
VGWVDLTWEVYGEVVKYGGWVNVYTVNIMVNALCKDGKIAKVGSFLLEMEAKGVFPDNVTYSTLINAYLREGNVQKGFELMRLMSSKGLRPGLFTYNSVLKGLCRV

Click here to download the sequence:
Link to NCBI Protein BLAST