Transcript Information: R_Transcript_215227.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value1E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.15941450615475
Replicate 20
Replicate 30.20005884363452
Condition 2: 8 Hour
Replicate 10.10692517444212
Replicate 20.1952915444645
Replicate 30.15852935039639
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_215227.p1 GENE.R_Transcript_215227~~R_Transcript_215227.p1 ORF type:5prime_partial len:229 (-),score=11.04,gag_pre-integrs|PF13976.2|1.6e-17 R_Transcript_215227:120-806(-)
AACTCTACTTCATGGGTATTAGATACCGGCTGTGGTGCTCACATTTGTTGCAATGTGCAGGGGCTGCAAAGACGTAGAAAGCTTGGCAAGGGAGAGGTCGACCTACGAGTTGGAAACAAGGCAAGAGTTGCTGCGTTGGCTGTAGGAACCTTTGTTTTGACACTACCTTCTGGACTTATAGTAGAACTTAATAATTGTTATTATGTTCCTACACTTAGCAAAAACATTATTTCTGTTTCTGTTTTGGCTTCGGAAGGATATGATTTTCAGTTTATTGGCAATAAATGTGATTTCTATAAAGACGTTGTGTGCTATGGTAGCACAACCATTGTCAATGGCCTTTATCTGCTAAATCTAGACAAACAAATCTATCATATTCAAAACAAGAAGGTCAAATCCAACGACACTAATCAAACATATCTTTGGCACTGTCGTCTAGGCCATATAAATGAGAAACGCATTCAAAAGCTCCACAAAGGTGGGCTTCTAGATTCATTTGACTTTGAGTCATTTCAACTATGCGAAGCTTGTTTAATGGGTAGGATGACCAAGTCACCTTTCACCGGGAAGGGCGAAAGAGAAAGTGACCTCTTGGGTCTCATACATACCGATGTATGCGGACCCCTGAGCACCGAAGGTAGAGGTAGGTGCAACTACTTCATTTCTTTTGCTGACGATTTAAGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_215227.p1 GENE.R_Transcript_215227~~R_Transcript_215227.p1 ORF type:5prime_partial len:229 (-),score=11.04,gag_pre-integrs|PF13976.2|1.6e-17 R_Transcript_215227:120-806(-)
NSTSWVLDTGCGAHICCNVQGLQRRRKLGKGEVDLRVGNKARVAALAVGTFVLTLPSGLIVELNNCYYVPTLSKNIISVSVLASEGYDFQFIGNKCDFYKDVVCYGSTTIVNGLYLLNLDKQIYHIQNKKVKSNDTNQTYLWHCRLGHINEKRIQKLHKGGLLDSFDFESFQLCEACLMGRMTKSPFTGKGERESDLLGLIHTDVCGPLSTEGRGRCNYFISFADDLS*

Click here to download the sequence:
Link to NCBI Protein BLAST