Transcript Information: R_Transcript_215528.p1


Annotated TAIR IDAT4G04890.1
Annotated Gene Nameprotodermal factor 2
Annotated Gene Symbol(s)PDF2
Annotation TypeOrtholog
Chromosome Positionchr4:2476970-2480090 | Reverse length=743
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.29972021272116
Replicate 20.13790673508242
Replicate 30.26329583443853
Condition 2: 8 Hour
Replicate 10.84434017059466
Replicate 20.18358687882747
Replicate 30.29805600361883
Condition 3: 24 Hour
Replicate 10.15079019525586
Replicate 20.18107765920014
Replicate 30.1437616071389


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_215528.p1 GENE.R_Transcript_215528~~R_Transcript_215528.p1 ORF type:5prime_partial len:609 (+),score=93.72,START|PF01852.15|3.4e-59,START|PF01852.15|2.5e+03,START|PF01852.15|5.5e+03 R_Transcript_215528:2-1828(+)
CGAGCTGAAAATGAAAAGCTTCGAGCTGATAACATACGGTTCAAGGAAGCTCTTAGTAACGCTACGTGCCCTAATTGCGGAGGCCCTGCTGCTCTTGGTGAGATGTCTTTCGACGAGCAACAACTTAGAATTGAAAATGCTCGACTTAGAGAAGAGATTGATAGGATTTCAGGGATAGCAGCAAAGTATGTAGGAAAGCCATTAGTGACATACCCCCATATGTCGCCACACCTACCTTCGCGGTCCTCCCTAGACCTTGGAGTCGGGAGCTTTGGGCCACAATCGGGGATGGTTGGAGACATGTATGCAAGCTCTGCGGGGGATCTCCTCCGATCAGTGGCTCCACCCACCGAGGCAGACAAGCCTATGATCATTGAGCTCGCGGTGGCAGCCATGGAGGAACTTATAAGGATGGCTCAAGCAGTGGAGCCACTTTGGGTTCCTAGCCCTGATAACACAACTGAGAACCTCAATGAAGAAGAGTACTTCAGAACATTCCCTCGAGGGATTGGACCGACCCCAATGGGGTTGAAATCCGAGGCTTCTAGAGACTCCGCTGTTGTCATCATGAATCATATGAATCTTGTCGAAATCCTAATGGATGTGAATCAATGGTCATGTGTTTTCTCTGGGATCGTATCAAGAGCTATGACACTCGATGTTTTATCGACTGGTGTTGCTGGGAATTACAATGGTGCTTTGCAAGTGATGACAGCTGAGTTTCAAGTACCATCTCCTCTCGTTCCAACTCGTGAGAACTACTTTGTGAGGTATTGCAAGCAACATGGGGATGGTACATGGGCTGTGGTGGATGTTTCATTGGATATTTTGCGCCCTAGCCCTAGCCCCATCCCAAGGTGTCGTCGGAGGCCCTCCGGTTGCCTTATACAAGAATTGCCCAACGGTTACTCCAAGGTGACATGGGTTGAACATGCCGAAATAGATGACAGGGCAGTCCATAACATATACAGAGCACTAGTAAATTCAGGGCTTGCATTTGGTGCTAAACGTTGGGTTTCGACTTTGGATAGACAATGTGAAAGACTTGCTAGTGTAATGGCTAGCAACATTCCATCCGGCGAGGGTGGTGTGATTACAAGTCCGGAAGGAAGGAAGAGCATGTTGAAGCTAGCGGAGAGGATGGTGATGAGCTTCTGTGCAGGTGTAGGAGCTTCGACAGCCCACACATGGACCACATTATCTGGAAGTGGTGCTGATGATGTTCGAGTCATGACCCGTAAGAGCATGGATGACCCAGGTAGACCCCCTGGCATTGTGCTTAGTGCCGCTACTTCTTTCTGGATGCCTGTGCCTCCCAAACGTGTCTTCGATTTCCTTCGTGATGAGAACTCTAGGAGCGAGTGGGATATCCTCTCAAATGGTGGCCTAGTCCAGGAAATGGCTCACATAGCCAATGGCCGCGATCCTGGAAACTGTGTTTCGCTCCTACGAGTGAATAGTGCAAATTCGAGCCAGAGCAATATGCTAATACTCCAAGAGAGCTGCACGGATGCAACAGGCTTCTATGTAATCTATGCACCGGTGGACATAGTCGCAATGAACGTGGTTTTGAATGGAGGGGACCCTGACTATGTCGCGCTCTTGCCATCAGGGTTTGCGATACTGCCTGATGGTCAGGTGGGTGCTCATGGCGGAGGGGCCCTGGAGGTGGGCTCCGGGGGCTCGTTGCTAACCGTGGCATTTCAAATTCTGGTGGATTCGGTCCCTACAGCCAAGCTCTCCTTAGGCTCTGTGGCAACTGTTAATAGTCTGATTAAGTGCACAGTTGAGAGAATTAAGGCTGCCGTGGCTGGTGATAGCTGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_215528.p1 GENE.R_Transcript_215528~~R_Transcript_215528.p1 ORF type:5prime_partial len:609 (+),score=93.72,START|PF01852.15|3.4e-59,START|PF01852.15|2.5e+03,START|PF01852.15|5.5e+03 R_Transcript_215528:2-1828(+)
RAENEKLRADNIRFKEALSNATCPNCGGPAALGEMSFDEQQLRIENARLREEIDRISGIAAKYVGKPLVTYPHMSPHLPSRSSLDLGVGSFGPQSGMVGDMYASSAGDLLRSVAPPTEADKPMIIELAVAAMEELIRMAQAVEPLWVPSPDNTTENLNEEEYFRTFPRGIGPTPMGLKSEASRDSAVVIMNHMNLVEILMDVNQWSCVFSGIVSRAMTLDVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRENYFVRYCKQHGDGTWAVVDVSLDILRPSPSPIPRCRRRPSGCLIQELPNGYSKVTWVEHAEIDDRAVHNIYRALVNSGLAFGAKRWVSTLDRQCERLASVMASNIPSGEGGVITSPEGRKSMLKLAERMVMSFCAGVGASTAHTWTTLSGSGADDVRVMTRKSMDDPGRPPGIVLSAATSFWMPVPPKRVFDFLRDENSRSEWDILSNGGLVQEMAHIANGRDPGNCVSLLRVNSANSSQSNMLILQESCTDATGFYVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGQVGAHGGGALEVGSGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIKCTVERIKAAVAGDSC*

Click here to download the sequence:
Link to NCBI Protein BLAST