Transcript Information: R_Transcript_21565.p1


Annotated TAIR IDAT5G40340.1
Annotated Gene NameTudor/PWWP/MBT superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:16131654-16134680 | Reverse length=1008
E-Value7E-69
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.4090202275263
Replicate 21.2363303798429
Replicate 31.1627785581803
Condition 2: 8 Hour
Replicate 12.6350270907695
Replicate 22.610661331712
Replicate 33.7040342484241
Condition 3: 24 Hour
Replicate 12.7735828021287
Replicate 21.4778143012976
Replicate 32.35542811859


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_21565.p1 GENE.R_Transcript_21565~~R_Transcript_21565.p1 ORF type:3prime_partial len:985 (+),score=287.03,PWWP|PF00855.13|3.1e+03,PWWP|PF00855.13|5.6e-21,PWWP|PF00855.13|1e+04 R_Transcript_21565:205-3156(+)
ATGGAAAATGATGATGAGAAATTATTAGTAGGTGTTAAGACAAAAGACCTAAACGAGTTTGATCAGTCTAAAGACTCAACCTTTGATAAACCCTTGAAAGAAACACAAGAAAAGTTGGAATCTTTGAGTACTAGTGCTAGCAGTGATTTGACTATTTCAGGAACAATTATGGGTGCCCAACTTGCAAAAAGTCAACATGAGAATGGCGGGTTCAAGGTCTTAGATGAAGAGAAAGAGAAAGAAAAAGTAGTGTTTGATGATGGTGGTGGGATTGTTGATGAATTTCATGATGTGGGGGATCAAAAGACAGGTGGTAAAAAGGTTTTTGTTGCTAGTGATGAAAAGAATGGTGAGCATCAGCTCGATCGAGATCGAATAGGGGATGAAAATGTTGATGGGTTGACACAGAAGTTAGAAAGTAGTGACAATGTTGATGGTGGTGGTGGTGGTAGTGAATTGAACATGCCGAGAAGGAGTGGTCGCTTGTCGAAAATTGAGTCTGAGAAAAGCAAGTCTCATATGAATGGGGATATGGACCACAAGAAGGGAATAGATAGTGATACTTTGAGTAGTGTTTCGCAGAGGACGAGGGGGATAGTTACGAGAGGTAAAAAAGAAGAGATTAAAGATGTGGATGTCGAGCAAACAGAATGCGAAAAATGGGATGATGATGAACATGGTCATTTGGGGTTTTCTGTGGGGGATTTTGTTTGGGGAAAAATTAAGAGTCATCCGTGGTGGCCAGGGAGAGTATATAATCCTTCAGATGCATCAGAGTATGCTCTGAAATACAAGCATGAGGGGCGACTCCTTGTTGCCTATTTCGGAGATGGGACTTTTGCTTGGTGTGATTCTTCACAGTTGGTACCTTTTGAGGAGAATTTCGAAGAAATGTCGAAGCAAAGCAACACCAAGAGCTTTGTTCATGCTGTAGAGGAAGTGGTGAATGAATTTGTTACTCTTGTGGAGCTACAATTGAGTGGCGGAAGTCAGAGCTCTCTCCCCGTGGTAGCAAACGCAGGTATCAAACACGGCATTCATGTGCCCTTGTGTGGAGTTGAGAAGTCCTCAGTTGCTCGGTTTGACCCAGCAGAAATGCTTGCTGGTTTAAAGCTTGTGGCAAAATCAGTTTCTGCGGCTAATATGCTTGAGCTTGCAGTGTTCAAGAGTCGATTATCAGCCTTGTGTAATGCTAAGGGTGTTAACTTAGAGTCATACCATGAACCTTTGGGAATTGAAGGCCTTCTGGATAATGAAGATGTACCTAAGAAGAGTTTGGCTCGAGGTCCAGTTGATGGGGACTGGTTTCCAGAGGCAGGGTGTAGCTCACCAACTAGAAATGGACCGGAGACACCAGATGATAAATCACACAAGAAAAGGAAGGAGAAAACCATTGCTGAGCTGCTGGGAAGTGACACAAAAATCGAGTTGGAAGGGGAGACACAATCTGTAAAGTTGGCGTCTAGAGGTAGGAAGAAAAAGCAGAGGGTTACTGATGAGGATCAGGCTGCTGAACATGAGCTTAATGGTGATGAATCAGGTAGTGCTAGAATAGCAGAGGATTCAGAGAAACTGGTGTCAAAATCTGGTAGGAAAAGGCGAAAGATCAGTGCTATTGATCAAAGCACTGTGGCAGATGGATTGATTGTTACCAGGTCAAACGCAAGGAAGAAAGAGGCGTCTGCAAGAACCAGTGTCACTGAAAAGAATGTGTCAAGTGACAAAATGGATGGTAGTTCCAGGAAGGACATACGAAAATTGGCTAGGGTGCCAAGCCTGAAAATCGACAATGGACTGATGACTGAAGAGATGCATGAAAGGGTTTCTCCGAGGGAGAAAAAAAAGAGCAAGTACTTGTCCCCTCCTTACACAAGTCTACAACAGAGGCAGAGAATTTCGACTTTGGGGTCTGAAGCAAACGGTCTAGAGTTCTCTGACGTCACTAAGATGGGAGAGAGGATGACTAAGGCTGCTGGCAAACTCATGGGATCCCCTCCATTGGTAAAATGCAGTTCTGAAACAATTTGGAGAACCACAAGGGGATCGGCTTCTTCACTTGATAGAACTGATAGCCCCAATCTTCAAACAGCCAAGAAAGACAGGAGTGACAAGGTCAAAGGTTCTGTGAAAAACGTTGGATCTCCTGATAGTGTGCTTTGTGAAATCCGGTCTGCTGCTCTTGATCCACTATATGCCAGGACTGATGATTCATCCTTTGATACAACCAGGGGCTTTTTGTCTTCTTATAGGAGTTCTCATTACAAAAACGGATTGGACTATAATGTCTACAAGAAACAGTTGGCCAGTCATCAGAAGAGGAAGAGAAATTTGTCAGATGGGAATGTTTTGAATCAGGTTGATGAGCATGCTTCTGAGCCTAAAATGGTTGGAAGGAGTTCCACCAGGAAGAAGGATGATCATGCCTCTGAGCCTAAATCCATTGGAAGGAGGTCCTCAGCTAGGAAGAAGGATGAGCAGTCCTCTGATCCTAAATCGGTTAGAAGGAGGCCCAACGGGAAGAAAGAGGGGAAGTCGGATTCCAATGCTGCTCTTGTGATGACTTTTCCTCGAGAGTTCTCCTTGCCATTGAAGGAAGATCTCATCAAAACGCATTCCAAGTTTGGTGTCTTGGATGAGTCAAGAACAGAGGTAGTCCCAGAATCATCAACAGCAAAGGTGGTTTTTGTCGAGAGTTCTGAAGCTGAAACTGCTATGGAAAGTATACAGAAGAACAATCCTTTCGGACCAGCCAATGTGAGCTATGAAATTCAACACCTCACAGCTGTTCCCAAGGCGAGAAAACTCAGTGCACAGAACAAAAAGAAAAGCATAACTGACCCAAAAATGGAAGGAAAATCGCCTGACAAACCACCACCCGCAGCAGCTGAGAATGAACCCTTGGCTGTTGTGTTCATAAAGCAGAAGCTCCAGGGGATGACATCAATGTTAGCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_21565.p1 GENE.R_Transcript_21565~~R_Transcript_21565.p1 ORF type:3prime_partial len:985 (+),score=287.03,PWWP|PF00855.13|3.1e+03,PWWP|PF00855.13|5.6e-21,PWWP|PF00855.13|1e+04 R_Transcript_21565:205-3156(+)
MENDDEKLLVGVKTKDLNEFDQSKDSTFDKPLKETQEKLESLSTSASSDLTISGTIMGAQLAKSQHENGGFKVLDEEKEKEKVVFDDGGGIVDEFHDVGDQKTGGKKVFVASDEKNGEHQLDRDRIGDENVDGLTQKLESSDNVDGGGGGSELNMPRRSGRLSKIESEKSKSHMNGDMDHKKGIDSDTLSSVSQRTRGIVTRGKKEEIKDVDVEQTECEKWDDDEHGHLGFSVGDFVWGKIKSHPWWPGRVYNPSDASEYALKYKHEGRLLVAYFGDGTFAWCDSSQLVPFEENFEEMSKQSNTKSFVHAVEEVVNEFVTLVELQLSGGSQSSLPVVANAGIKHGIHVPLCGVEKSSVARFDPAEMLAGLKLVAKSVSAANMLELAVFKSRLSALCNAKGVNLESYHEPLGIEGLLDNEDVPKKSLARGPVDGDWFPEAGCSSPTRNGPETPDDKSHKKRKEKTIAELLGSDTKIELEGETQSVKLASRGRKKKQRVTDEDQAAEHELNGDESGSARIAEDSEKLVSKSGRKRRKISAIDQSTVADGLIVTRSNARKKEASARTSVTEKNVSSDKMDGSSRKDIRKLARVPSLKIDNGLMTEEMHERVSPREKKKSKYLSPPYTSLQQRQRISTLGSEANGLEFSDVTKMGERMTKAAGKLMGSPPLVKCSSETIWRTTRGSASSLDRTDSPNLQTAKKDRSDKVKGSVKNVGSPDSVLCEIRSAALDPLYARTDDSSFDTTRGFLSSYRSSHYKNGLDYNVYKKQLASHQKRKRNLSDGNVLNQVDEHASEPKMVGRSSTRKKDDHASEPKSIGRRSSARKKDEQSSDPKSVRRRPNGKKEGKSDSNAALVMTFPREFSLPLKEDLIKTHSKFGVLDESRTEVVPESSTAKVVFVESSEAETAMESIQKNNPFGPANVSYEIQHLTAVPKARKLSAQNKKKSITDPKMEGKSPDKPPPAAAENEPLAVVFIKQKLQGMTSMLA

Click here to download the sequence:
Link to NCBI Protein BLAST