Transcript Information: R_Transcript_21567.p1


Annotated TAIR IDAT5G40340.1
Annotated Gene NameTudor/PWWP/MBT superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:16131654-16134680 | Reverse length=1008
E-Value5.6E-70
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.3024374617236
Replicate 24.0804130997711
Replicate 35.8563451778843
Condition 2: 8 Hour
Replicate 15.7287684027517
Replicate 26.4340273222279
Replicate 37.1065267994911
Condition 3: 24 Hour
Replicate 16.2592512158552
Replicate 23.890880577866
Replicate 35.4719261717243


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_21567.p1 GENE.R_Transcript_21567~~R_Transcript_21567.p1 ORF type:complete len:1060 (+),score=311.01,PWWP|PF00855.13|3.5e+03,PWWP|PF00855.13|6.2e-21,PWWP|PF00855.13|1.1e+04 R_Transcript_21567:205-3384(+)
ATGGAAAATGATGATGAGAAATTATTAGTAGGTGTTAAGACAAAAGACCTAAACGAGTTTGATCAGTCTAAAGACTCAACCTTTGATAAACCCTTGAAAGAAACACAAGAAAAGTTGGAATCTTTGAGTACTAGTGCTAGCAGTGATTTGACTATTTCAGGAACAATTATGGGTGCCCAACTTGCAAAAAGTCAACATGAGAATGGCGGGTTCAAGGTCTTAGATGAAGAGAAAGAGAAAGAAAAAGTAGTGTTTGATGATGGTGGTGGGATTGTTGATGAATTTCATGATGTGGGGGATCAAAAGACAGGTGGTAAAAAGGTTTTTGTTGCTAGTGATGAAAAGAATGGTGAGCATCAGCTCGATCGAGATCGAATAGGGGATGAAAATGTTGATGGGTTGACACAGAAGTTAGAAAGTAGTGACAATGTTGATGGTGGTGGTGGTGGTAGTGAATTGAACATGCCGAGAAGGAGTGGTCGCTTGTCGAAAATTGAGTCTGAGAAAAGCAAGTCTCATATGAATGGGGATATGGACCACAAGAAGGGAATAGATAGTGATACTTTGAGTAGTGTTTCGCAGAGGACGAGGGGGATAGTTACGAGAGGTAAAAAAGAAGAGATTAAAGATGTGGATGTCGAGCAAACAGAATGCGAAAAATGGGATGATGATGAACATGGTCATTTGGGGTTTTCTGTGGGGGATTTTGTTTGGGGAAAAATTAAGAGTCATCCGTGGTGGCCAGGGAGAGTATATAATCCTTCAGATGCATCAGAGTATGCTCTGAAATACAAGCATGAGGGGCGACTCCTTGTTGCCTATTTCGGAGATGGGACTTTTGCTTGGTGTGATTCTTCACAGTTGGTACCTTTTGAGGAGAATTTCGAAGAAATGTCGAAGCAAAGCAACACCAAGAGCTTTGTTCATGCTGTAGAGGAAGTGGTGAATGAATTTGTTACTCTTGTGGAGCTACAATTGAGTGGCGGAAGTCAGAGCTCTCTCCCCGTGGTAGCAAACGCAGGTATCAAACACGGCATTCATGTGCCCTTGTGTGGAGTTGAGAAGTCCTCAGTTGCTCGGTTTGACCCAGCAGAAATGCTTGCTGGTTTAAAGCTTGTGGCAAAATCAGTTTCTGCGGCTAATATGCTTGAGCTTGCAGTGTTCAAGAGTCGATTATCAGCCTTGTGTAATGCTAAGGGTGTTAACTTAGAGTCATACCATGAACCTTTGGGAATTGAAGGCCTTCTGGATAATGAAGATGTACCTAAGAAGAGTTTGGCTCGAGGTCCAGTTGATGGGGACTGGTTTCCAGAGGCAGGGTGTAGCTCACCAACTAGAAATGGACCGGAGACACCAGATGATAAATCACACAAGAAAAGGAAGGAGAAAACCATTGCTGAGCTGCTGGGAAGTGACACAAAAATCGAGTTGGAAGGGGAGACACAATCTGTAAAGTTGGCGTCTAGAGGTAGGAAGAAAAAGCAGAGGGTTACTGATGAGGATCAGGCTGCTGAACATGAGCTTAATGGTGATGAATCAGGTAGTGCTAGAATAGCAGAGGATTCAGAGAAACTGGTGTCAAAATCTGGTAGGAAAAGGCGAAAGATCAGTGCTATTGATCAAAGCACTGTGGCAGATGGATTGATTGTTACCAGGTCAAACGCAAGGAAGAAAGAGGCGTCTGCAAGAACCAGTGTCACTGAAAAGAATGTGTCAAGTGACAAAATGGATGGTAGTTCCAGGAAGGACATACGAAAATTGGCTAGGGTGCCAAGCCTGAAAATCGACAATGGACTGATGACTGAAGAGATGCATGAAAGGGTTTCTCCGAGGGAGAAAAAAAAGAGCAAGTACTTGTCCCCTCCTTACACAAGTCTACAACAGAGGCAGAGAATTTCGACTTTGGGGTCTGAAGCAAACGGTCTAGAGTTCTCTGACGTCACTAAGATGGGAGAGAGGATGACTAAGGCTGCTGGCAAACTCATGGGATCCCCTCCATTGGTAAAATGCAGTTCTGAAACAATTTGGAGAACCACAAGGGGATCGGCTTCTTCACTTGATAGAACTGATAGCCCCAATTTTCAAACAGGCAAGAAAGACAGGAGTGACCTGGTCAAAGTTTCTGCGAAAAAAGTTGGATCTCCTGACAGTGTGCTTTGTGAAATCCGGTCTGCTGCTCTTGATCCACTATATGCCAGGACTGATGATTCATCCTTTGATACAACCAGGGGCTTTTTGTCTTCTTATAGGAGTTCTCATTACAAAAACGGATTGGACTATAATGTCTACAAGAAACAGTTGGCCAGTCATCAGAAGAGGAAGAGAAATTTGTCAGATGGGAATGTTTTGAATCAGGTTGATGAGCATGCTTCTGAGCCTAAAACGGTTGGTAGGAGATCCACCAGGAAGAAGGATGATCAAGCCTCTGAGCCTAAGTCCGTTGGAAGGAGTTCCTCAGGCAGGAAGAAGGATGAGCATTCCTCTGCACCTAAATCGGTTGGAAGGAGGTCCTCAGCAAGGAAGAATGATGCGAAACCCTCTGAGCCTAAATCCATTGGAAGGAGGTCCTCAGCTAGGAAGAAGGATGAGCAGTCCTTTGATCCTAAATTGGTTGGAAGGAGGTCCAACAGGAAGAAAGAGGGAAAGTCGGATTCAAATGCTGCTCTTGTGATGACATTCCCTCGAGAGTTCTCCTTGCCATCGAAGGAAGATCTCATCAAAACGCATTCCAAGTTTGGTGTCTTGGATGAGTCAAGAACAGAGGTAGTCCCAGAATCATCAACAGCAAAGGTGGTTTTTGTCAAGAGCTCAGAAGCTGAAATTGCCATGGGAAGTATGCAGAAGAACAATCCTTTCGGAGCCGCCAATGTGAGCTATGGAATTCAACACCTCACAGCTGTTCCCAAGTCGAGAAAAATCAGTGCACAGAATAAAAAGAAAAGCATAACTGACTCGAAAGTGGAAGGAAAATCGTCTGACAAACCACCACCACCAGCACCTGAGGATGAACCCTTGGCTGTCGTGTTCATAAAGCAGAAGCTCAAGGGGATGACATCAATGTTAGCTCAGAGCGATGGGAAGATGTCACATGAGATAAAATCAAACCTTGAGAGCGAGGTGAAGGAGCTCTTGAAGAAGGTGAAGATGATGACTGCTGCTTCGTCTTCTGCTTCATCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_21567.p1 GENE.R_Transcript_21567~~R_Transcript_21567.p1 ORF type:complete len:1060 (+),score=311.01,PWWP|PF00855.13|3.5e+03,PWWP|PF00855.13|6.2e-21,PWWP|PF00855.13|1.1e+04 R_Transcript_21567:205-3384(+)
MENDDEKLLVGVKTKDLNEFDQSKDSTFDKPLKETQEKLESLSTSASSDLTISGTIMGAQLAKSQHENGGFKVLDEEKEKEKVVFDDGGGIVDEFHDVGDQKTGGKKVFVASDEKNGEHQLDRDRIGDENVDGLTQKLESSDNVDGGGGGSELNMPRRSGRLSKIESEKSKSHMNGDMDHKKGIDSDTLSSVSQRTRGIVTRGKKEEIKDVDVEQTECEKWDDDEHGHLGFSVGDFVWGKIKSHPWWPGRVYNPSDASEYALKYKHEGRLLVAYFGDGTFAWCDSSQLVPFEENFEEMSKQSNTKSFVHAVEEVVNEFVTLVELQLSGGSQSSLPVVANAGIKHGIHVPLCGVEKSSVARFDPAEMLAGLKLVAKSVSAANMLELAVFKSRLSALCNAKGVNLESYHEPLGIEGLLDNEDVPKKSLARGPVDGDWFPEAGCSSPTRNGPETPDDKSHKKRKEKTIAELLGSDTKIELEGETQSVKLASRGRKKKQRVTDEDQAAEHELNGDESGSARIAEDSEKLVSKSGRKRRKISAIDQSTVADGLIVTRSNARKKEASARTSVTEKNVSSDKMDGSSRKDIRKLARVPSLKIDNGLMTEEMHERVSPREKKKSKYLSPPYTSLQQRQRISTLGSEANGLEFSDVTKMGERMTKAAGKLMGSPPLVKCSSETIWRTTRGSASSLDRTDSPNFQTGKKDRSDLVKVSAKKVGSPDSVLCEIRSAALDPLYARTDDSSFDTTRGFLSSYRSSHYKNGLDYNVYKKQLASHQKRKRNLSDGNVLNQVDEHASEPKTVGRRSTRKKDDQASEPKSVGRSSSGRKKDEHSSAPKSVGRRSSARKNDAKPSEPKSIGRRSSARKKDEQSFDPKLVGRRSNRKKEGKSDSNAALVMTFPREFSLPSKEDLIKTHSKFGVLDESRTEVVPESSTAKVVFVKSSEAEIAMGSMQKNNPFGAANVSYGIQHLTAVPKSRKISAQNKKKSITDSKVEGKSSDKPPPPAPEDEPLAVVFIKQKLKGMTSMLAQSDGKMSHEIKSNLESEVKELLKKVKMMTAASSSASS*

Click here to download the sequence:
Link to NCBI Protein BLAST