Transcript Information: R_Transcript_215681.p1


Annotated TAIR IDAT3G47860.1
Annotated Gene Namechloroplastic lipocalin
Annotated Gene Symbol(s)CHL
Annotation TypeOrtholog
Chromosome Positionchr3:17656778-17658269 | Reverse length=353
E-Value5.4E-142
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.6684037147043
Replicate 27.0194732160996
Replicate 37.9292553217451
Condition 2: 8 Hour
Replicate 16.8096784172812
Replicate 29.5265295418069
Replicate 39.3443202601992
Condition 3: 24 Hour
Replicate 110.392143508399
Replicate 26.6557290143162
Replicate 39.0011566611797


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_215681.p1 GENE.R_Transcript_215681~~R_Transcript_215681.p1 ORF type:complete len:338 (+),score=60.71,Lipocalin_2|PF08212.8|3e-08 R_Transcript_215681:522-1535(+)
ATGCAGGTAATTCGAGTTTCTTTACCTTCTCCAGTTCTTCTTCTTCCTCCTTCTTCACAGCTTCCAAGGCCTAGGAGGAAGCCTGAAAATGTAGTTGTCAGATGTTCACTTGAGTGCCAAGCTTCAGGCAATGCTATTTTAAGACATGCAGTAACTGGACTGGTTGCTTCATGTTTAGTCTTTTCACAAACATGCTTGGTGCACGCAGGGGATATCGCTCATGAAAACAGTATATGCCAGCTTGCCAATGTCTCCGATAATCAGGTTTCCTTTCCACTTGATGATAGCTCCAGCGATGTAAATGTACAGATGATGATGATGATGACGAGAGGCATGACAGCAAAAAATTTTGATCCAGTGAGATATGCTGGCAGATGGTTTGAAGTGGCCTCACTTAAACGTGGATTTGCTGGACAGGGTCAAGAAGACTGCCATTGCACCCAGGGCGTCTACACATTTGATATGAAGGCACCTTCCATTCAAGTGGATACTTTTTGTGTACATGGGGGTCCAGCTGGATATATCACTGGTATTAGGGGAAAGGTTCAATGCTTACCAGATGAGGAGTTGGCGAAGAACGAAACTGAGTTAGAGAGGCAAGAGATGATCAAAGAGAAGTGCTACCTTCGTTTCCCGACTCTGCCATTTATTCCGAAGGAGCCTTATGATGTGATTGCTACTGATTACGACCACTTTGCCCTTGTTTCAGGGGCCAAAGACACAAGTTTTATCCAGATCTACTCCAGAACACCAAACCCTGGACCTGAATTCATCCAGAAATACAAAGCCTATCTAGCAGACTTCGGATATGATGCAAACATTATCAAGGATACACCACAAGATTGTCAGATCATGTCAAACAGCCAACTAGCTTCAATGATGTCTCAAACTGGAATGCAGCAGGTTCTAAACAACCAGTTCCCTGATCTGGAACTAAAAGGTTCTGTAGCGTTTAACCCCTTGACAAGTGTGTTCGACACATTGAAGAAACTTGTTGAACTCTACTTCAAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_215681.p1 GENE.R_Transcript_215681~~R_Transcript_215681.p1 ORF type:complete len:338 (+),score=60.71,Lipocalin_2|PF08212.8|3e-08 R_Transcript_215681:522-1535(+)
MQVIRVSLPSPVLLLPPSSQLPRPRRKPENVVVRCSLECQASGNAILRHAVTGLVASCLVFSQTCLVHAGDIAHENSICQLANVSDNQVSFPLDDSSSDVNVQMMMMMTRGMTAKNFDPVRYAGRWFEVASLKRGFAGQGQEDCHCTQGVYTFDMKAPSIQVDTFCVHGGPAGYITGIRGKVQCLPDEELAKNETELERQEMIKEKCYLRFPTLPFIPKEPYDVIATDYDHFALVSGAKDTSFIQIYSRTPNPGPEFIQKYKAYLADFGYDANIIKDTPQDCQIMSNSQLASMMSQTGMQQVLNNQFPDLELKGSVAFNPLTSVFDTLKKLVELYFK*

Click here to download the sequence:
Link to NCBI Protein BLAST