Transcript Information: R_Transcript_21572.p1


Annotated TAIR IDAT5G23570.1
Annotated Gene NameXS domain-containing protein / XS zinc finger domain-containing protein-related
Annotated Gene Symbol(s)SGS3, ATSGS3
Annotation TypeOrtholog
Chromosome Positionchr5:7943621-7945874 | Forward length=625
E-Value4.9E-214
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 186.201483412867
Replicate 278.843984268736
Replicate 381.820983947901
Condition 2: 8 Hour
Replicate 1142.30312608039
Replicate 2156.21985943842
Replicate 3151.64676064532
Condition 3: 24 Hour
Replicate 198.907265385109
Replicate 280.630098855107
Replicate 390.92392392194


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_21572.p1 GENE.R_Transcript_21572~~R_Transcript_21572.p1 ORF type:complete len:584 (+),score=172.98,XS|PF03468.10|3.9e-34,XS|PF03468.10|3.3e+03,XS|PF03468.10|2.6e+03,zf-XS|PF03470.10|8.5e+03,zf-XS|PF03470.10|1.4e-10,zf-XS|PF03470.10|1.4e+04 R_Transcript_21572:214-1965(+)
ATGAGTTCGGGAAAGGCAGTTGATAAGTTGAGTCAGAGTGTTGGCAATATGAACTTGAAGTCTCCAGAGGAAGGCATTTGGGAATCGGTCAGTAGGAAACATAAGGGCAAAGCTGGAACACCGTGGAGGCAGCAAACATCTGCACCTAAAGCATGGGGCCAGCCTGATACTGCGCAGAGGCTGGGGATGTGTGGCGGCAATGCTCCTGGGAGTGCCAGGAATAATCTAAGCACTGATTTAAGGAGACAAGGTAGCGGGGTCACGAGGCCACAACCAGAGGTGGCACCTCCAACACAACAGTGGAATCAGCAATTGAGAACATCTCAAGTGGAAGAGGAAGAAGTTGTGGACAAAGAAGAGGACAAGGCAGAGGAAGAAGAGGAAGAGGATGTGTACATTGATGATGAGGATGGTGACCTGCTGTCCGATGATTATGATTCAGATGACGGTCCACTGAGCCATGAGGATAAGAAAAAGCATAGGATGCTGAAGGCATTCTTTGACATATTAGACAAGTTAACAGTACAGGAAATCAATGAGCCTGAAAGGCAGTGGCATTGCCCTGCATGCCAAGGTGGTCCTGGCGCAATTGATTGGTATAAGGGGCTCCAGCCTCTCATAACTCATGCAAAAACAAAGGGATCAAAAAGAGTGAAGCTCCACAGGGAGTTTGCTAACATCTTGGATGAGGAACTCCAGAGAAGAGGAACATCTGTGGTGCCTTCTGGAGAATCCTTTGGGCAGTGGGAGGGCTTAAAGGAAAATAAAGATCATGACATTGTTTGGCCTCCCATGGTTGTCATCATGAACACAATACTTGAGAAGGATGATAATGACAAGTGGCTTGGCATGGGAAACCAGGAACTCCTGGACTACTTCAGAGGATATGATGCAGTGAAGGCAAGACACTCCTATGGCCCTAAGGGCCACCGTGGCGTAAGTGTCTTGATTTTCGAGAGCTCAGCCATGGGCTATGTGGAGGCTGAACGGCTGCACAAGCACTTCCTTGGACAGGGAACTGGAAGGAATGCATGGGAGAGCAAAGGGAGAACACTCTTTTATCCAGGAGGGAAGCGACAACTTTATGGTTTCCTTGCAAGAAAGGAAGATCTCGAGGAATTTAACAGGCATTCTCAAGGGAAAGCGAGACTGAAGTATGACATGAGGTCTTACCAAGAGACTGTTGTCACCCAGATGAAGCAGATCAGTGAAGACAATCAGCAACTGACTTGGTTCAAAAACAAGGTTGCCAAAGAACAACGGAACTCAAAAGCCCTGGAGGAGTCTTTAAGCATTGTCAGTCAGAAGCTTCGTAAAACAATGGAAGAAAATCGGATCGTAAGACAAAGAACCAAATTGCAGCATGAGCAGAACAAGGAAGAGATGGATTACCAAGAGCAATTCTTCAAGGAACAGATCAACAAGATCCATGAAAGTACTGATGTGAAAGAGGATAACTTTGAGAAGCTTCAGCAGGAAGAACGAAAAAAGTTCGAGGAGGGCACCGTGGTTGCTTCAAACAAGGGGGATCATAGGCGCAGGGCTGAGGAGGTGAGCAAGTTTATACAGTTCCAAGAACAAGAGATGGAGAAGTTTGTTGCTGAGAGAGAGAGGGTCATAAAGGAGCACGAGGCGAAGAAGTTGGAGATGAAGAAGAGACACTGGGAGGAAGAGGTGGAGCTGGAGAGCGATTTCGATGCAACATTGACCAAGCTAATGGAGAAATATGCACCTCGGCAGGGAAGCCAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_21572.p1 GENE.R_Transcript_21572~~R_Transcript_21572.p1 ORF type:complete len:584 (+),score=172.98,XS|PF03468.10|3.9e-34,XS|PF03468.10|3.3e+03,XS|PF03468.10|2.6e+03,zf-XS|PF03470.10|8.5e+03,zf-XS|PF03470.10|1.4e-10,zf-XS|PF03470.10|1.4e+04 R_Transcript_21572:214-1965(+)
MSSGKAVDKLSQSVGNMNLKSPEEGIWESVSRKHKGKAGTPWRQQTSAPKAWGQPDTAQRLGMCGGNAPGSARNNLSTDLRRQGSGVTRPQPEVAPPTQQWNQQLRTSQVEEEEVVDKEEDKAEEEEEEDVYIDDEDGDLLSDDYDSDDGPLSHEDKKKHRMLKAFFDILDKLTVQEINEPERQWHCPACQGGPGAIDWYKGLQPLITHAKTKGSKRVKLHREFANILDEELQRRGTSVVPSGESFGQWEGLKENKDHDIVWPPMVVIMNTILEKDDNDKWLGMGNQELLDYFRGYDAVKARHSYGPKGHRGVSVLIFESSAMGYVEAERLHKHFLGQGTGRNAWESKGRTLFYPGGKRQLYGFLARKEDLEEFNRHSQGKARLKYDMRSYQETVVTQMKQISEDNQQLTWFKNKVAKEQRNSKALEESLSIVSQKLRKTMEENRIVRQRTKLQHEQNKEEMDYQEQFFKEQINKIHESTDVKEDNFEKLQQEERKKFEEGTVVASNKGDHRRRAEEVSKFIQFQEQEMEKFVAERERVIKEHEAKKLEMKKRHWEEEVELESDFDATLTKLMEKYAPRQGSQ*

Click here to download the sequence:
Link to NCBI Protein BLAST