Transcript Information: R_Transcript_216196.p1


Annotated TAIR IDAT2G46050.1
Annotated Gene NamePentatricopeptide repeat (PPR-like) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:18939262-18941034 | Forward length=590
E-Value2.9E-158
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.36338207107403
Replicate 20.064307198824803
Replicate 30.24555461435386
Condition 2: 8 Hour
Replicate 10.26248247263509
Replicate 20.23970317440781
Replicate 30.55594519511139
Condition 3: 24 Hour
Replicate 10.56251901323624
Replicate 20.30397753447963
Replicate 30.50278035268524


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_216196.p1 GENE.R_Transcript_216196~~R_Transcript_216196.p1 ORF type:complete len:653 (+),score=100.85,PPR|PF01535.16|0.16,PPR|PF01535.16|1.1e+04,PPR|PF01535.16|1.1e+02,PPR|PF01535.16|0.038,PPR|PF01535.16|5.4e-05,PPR|PF01535.16|2.6e+03,PPR|PF01535.16|0.013,PPR|PF01535.16|3.9e-08,PPR|PF01535.16|32,PPR|PF01535.16|0.0012,PPR|PF01535.16|4.9,PPR|PF01535.16|53,PPR|PF01535.16|3.5,PPR_2|PF13041.2|1,PPR_2|PF13041.2|0.039,PPR_2|PF13041.2|10,PPR_2|PF13041.2|1e-06,PPR_2|PF13041.2|5.1,PPR_2|PF13041.2|4.3e-09,PPR_2|PF13041.2|3.4e+02,PPR_2|PF13041.2|2e-06,PPR_2|PF13041.2|63,PPR_2|PF13041.2|3.6,PPR_1|PF12854.3|2.8e+03,PPR_1|PF12854.3|1.3e+03,PPR_1|PF12854.3|4.8e+02,PPR_1|PF12854.3|1.6,PPR_1|PF12854.3|12,PPR_1|PF12854.3|5.8e+02,PPR_1|PF12854.3|0.7,PPR_1|PF12854.3|0.00016,PPR_1|PF12854.3|0.056,PPR_1|PF12854.3|7.4,PPR_1|PF12854.3|1.6e+03,PPR_3|PF13812.2|0.12,PPR_3|PF13812.2|1.3e+03,PPR_3|PF13812.2|4.4e+02,PPR_3|PF13812.2|62,PPR_3|PF13812.2|14,PPR_3|PF13812.2|9.6e+03,PPR_3|PF13812.2|8.5,PPR_3|PF13812.2|0.024,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|30,PPR_3|PF13812.2|0.41,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|3.7e+03,PPR_3|PF13812.2|12 R_Transcript_216196:245-2203(+)
ATGATTTCCAACCGCCATCTTCCTTCAATCTTAACCGTCCATTTCAAAAGTCAGTTATGTGTACCCGTATCACCATCGTACGGCTCTGATGAACAGCGAATTACGGAGCCTAACCTACAACGGAGAACCTCAGGAATCGGATCTTTGATGCCTAATTCCGAGTCAACTCAGCACCCAAATGCCCATTTGACTCAGTTTTTTGGTTCATTGGAAGCGAAACAGCTACATTCTCATGTGATAAAGTTGGGATGTTATGATGAAGTGTATGTGCAAAATAGAATCTTGCGTGCTTATGTGAAATGTGGGGAGTTTTGGAATGTGGGCAAAGTGTTTGATGAAATGCTTGTGAGAAATATGATGTCTTGGAATACAGTGGTTAAGGCTGCAGCATTTAGTGACTGTGATGTTGTTTCGAAGGTACAAATGGGTTTTTATTATTTTAGGAGAATGTTGCTGGAAATGGTGCAACCGGATTCCACAACCATGAATGCCTTGATTTCTGCTTGTGTGGAGTTGAATGACCTTGGAATAGGTAGACATTTGCACGGTTTTGTGGTGAATTTGGGGTTGAGTGCTGATCGATTTGTTGCGAGTGCGCTTGTTGATTTGTATGGCAAGTTTGGTTTAGTTAGAGATGCTAGGTGTGCTTTTGATGAGATGGAGACAAGGGACTTGATCGCGTGGAATGTGATGGTTTCTGCTTATTCCTTGAATTGCTTGGCAGAGGAAGCTTTTGGGCTTTTCAGATTAATGCAGTTAGAGGGTTTTCGAGGGGATGAGTTTACATTCGCCAGTCTTTTGAATTCGTGTAGCTTGGGTGGGTGCGGTGATTTAGGCAAGCAATTTCATGGGCTAGTTACTAAATTGTCATTTGATTTGGAGAAGCAAGTGGCTAGTGTTCTTGCTGATATGTATGCGAAAAATGGAAGTGTAATTGATGCTCGCAAAGTGTTTGATAGGATGGTTGTTCGGACCCTTGTTTCTTGGAACACTATGATTGTCGGTTATGGACAGCAAGGATATGGGAAGGAGGCTATGAAACTCTTTGTTGAAATGCTTAGGGAACATGTTGATCCAGATGAGCTAACTTTAGCCAGCATTGTTAGCTCTTGTGGCAATCTATCAGCCACCAGTGAAATAACACAAATTCATGCTTACATGCTCAAAAGTGAATTCAGCACACATTTATCAGTGGCTAATGCTCTAATAGTTGCGTACTCCAACTGTGGCAGCCTTGCAAGTGCTTCTCAATGCTTCAATTCGGTTACAGAACCAGATTTAGTTACTTGGACCTCAATTCTCAGTGCTCATGCATTCCATGGTCAGGTCAAGGCAAGCATTGATATCTTTGAGATGATGCTGTTGTGTGGTTTGAGGCCAGATGACATTGCCTTTCTTGCGATTCTTTCAGCATGCATCCATGGAGGTCTCATAAGAGAGGGGCTTCATTATTTTAAATTAATGGTCGCTGAATATAATGTTATACCAAATTCAGAACAGTATGCATGTCTTGTTGACCTTTTAGGGCGTGGGGGTTTCATGGATGAGGCTTCCAGAATTTTAACTTCAGGACCGGTTGCTCTTGAAATAAACACACTAGGGGCTCTCGTTGGAGCTGCTAAGGCTCATGGCCATGTTCAATTAGCAGAATGGGCTGCAGGAAAGCTCTTTCAATTGGAGCCCAACAACCCTGTGAATTACACCCTAATGTACAACATGTATGCATCTGTTGGCCAGTGGCATGATGCAGCCAGAGTTCGAAAGATGATGAAGGACAGGTGTGATTCCAAAGTACCTGGCTGTAGCTGGATTGAGATTTCAGGAAAGGTCCATTTATTTCTGTGTAGAGGCACGTCTCATTCTTTAGTATCAGAAGTGTATTATATGTTAGGCATATTGACAAGGCTATTGACAGAAGATGATTGTGTTACATTAGGTAATTCAAGGAGCAAATCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_216196.p1 GENE.R_Transcript_216196~~R_Transcript_216196.p1 ORF type:complete len:653 (+),score=100.85,PPR|PF01535.16|0.16,PPR|PF01535.16|1.1e+04,PPR|PF01535.16|1.1e+02,PPR|PF01535.16|0.038,PPR|PF01535.16|5.4e-05,PPR|PF01535.16|2.6e+03,PPR|PF01535.16|0.013,PPR|PF01535.16|3.9e-08,PPR|PF01535.16|32,PPR|PF01535.16|0.0012,PPR|PF01535.16|4.9,PPR|PF01535.16|53,PPR|PF01535.16|3.5,PPR_2|PF13041.2|1,PPR_2|PF13041.2|0.039,PPR_2|PF13041.2|10,PPR_2|PF13041.2|1e-06,PPR_2|PF13041.2|5.1,PPR_2|PF13041.2|4.3e-09,PPR_2|PF13041.2|3.4e+02,PPR_2|PF13041.2|2e-06,PPR_2|PF13041.2|63,PPR_2|PF13041.2|3.6,PPR_1|PF12854.3|2.8e+03,PPR_1|PF12854.3|1.3e+03,PPR_1|PF12854.3|4.8e+02,PPR_1|PF12854.3|1.6,PPR_1|PF12854.3|12,PPR_1|PF12854.3|5.8e+02,PPR_1|PF12854.3|0.7,PPR_1|PF12854.3|0.00016,PPR_1|PF12854.3|0.056,PPR_1|PF12854.3|7.4,PPR_1|PF12854.3|1.6e+03,PPR_3|PF13812.2|0.12,PPR_3|PF13812.2|1.3e+03,PPR_3|PF13812.2|4.4e+02,PPR_3|PF13812.2|62,PPR_3|PF13812.2|14,PPR_3|PF13812.2|9.6e+03,PPR_3|PF13812.2|8.5,PPR_3|PF13812.2|0.024,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|30,PPR_3|PF13812.2|0.41,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|3.7e+03,PPR_3|PF13812.2|12 R_Transcript_216196:245-2203(+)
MISNRHLPSILTVHFKSQLCVPVSPSYGSDEQRITEPNLQRRTSGIGSLMPNSESTQHPNAHLTQFFGSLEAKQLHSHVIKLGCYDEVYVQNRILRAYVKCGEFWNVGKVFDEMLVRNMMSWNTVVKAAAFSDCDVVSKVQMGFYYFRRMLLEMVQPDSTTMNALISACVELNDLGIGRHLHGFVVNLGLSADRFVASALVDLYGKFGLVRDARCAFDEMETRDLIAWNVMVSAYSLNCLAEEAFGLFRLMQLEGFRGDEFTFASLLNSCSLGGCGDLGKQFHGLVTKLSFDLEKQVASVLADMYAKNGSVIDARKVFDRMVVRTLVSWNTMIVGYGQQGYGKEAMKLFVEMLREHVDPDELTLASIVSSCGNLSATSEITQIHAYMLKSEFSTHLSVANALIVAYSNCGSLASASQCFNSVTEPDLVTWTSILSAHAFHGQVKASIDIFEMMLLCGLRPDDIAFLAILSACIHGGLIREGLHYFKLMVAEYNVIPNSEQYACLVDLLGRGGFMDEASRILTSGPVALEINTLGALVGAAKAHGHVQLAEWAAGKLFQLEPNNPVNYTLMYNMYASVGQWHDAARVRKMMKDRCDSKVPGCSWIEISGKVHLFLCRGTSHSLVSEVYYMLGILTRLLTEDDCVTLGNSRSKS*

Click here to download the sequence:
Link to NCBI Protein BLAST