Transcript Information: R_Transcript_21622.p1


Annotated TAIR IDAT5G10490.1
Annotated Gene NameMSCS-like 2
Annotated Gene Symbol(s)MSL2
Annotation TypeHomolog
Chromosome Positionchr5:3300376-3304005 | Reverse length=673
E-Value7E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.836631364263
Replicate 213.698121127211
Replicate 317.271925139345
Condition 2: 8 Hour
Replicate 116.760378145708
Replicate 222.600035657669
Replicate 318.831082675696
Condition 3: 24 Hour
Replicate 115.714434893829
Replicate 214.506934992198
Replicate 313.577399698824


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_21622.p1 GENE.R_Transcript_21622~~R_Transcript_21622.p1 ORF type:5prime_partial len:187 (+),score=65.32 R_Transcript_21622:2-562(+)
CGACCTACTGGAGAGCAAGACAACCGTGGCAAAGTACAGCCAGCAGCTGACCGCAAAACTGATGGTAAACCAGTGCCTGAGCCAAGTATGAAAGAGACCTCAAAGCCTGGCAAGAGGACAGATGGTAAAGTGGCAGAAACTTCAGATTCTGAATTAAGGGTAGAGAACAAGGTGGCTGTGGCTTCCCAATCAGATCCTCAAGGTGATGATGAAGCCACTGTAAAGCCCATGATTGTTACCACGAAAGTTTTGAAGAACTCAGAAAATGATCAATCTAAGGGGAGTGTTGATCATGCTGGCCCTGAAAAATCAATTGGCTCTTCAGTAAGCTCTCAGTCTAAGCACGTTGACAAGCTGTCAGCTTCTGAGCCATCTACATCAGCTCCAGCTGGTTTAGAAGAGAATATAGTTCTTGGGGTTGCATTGGAGGGTTCAAAGAGGACCCTGCCTATAGAAGGAGAGATTGATTCACCGTCAACTGCCTCAGAGACGAAAGAAATGGCTAAACATGGTAGTGGAAATGGTAGTCCGGCTGTTGATAAGGATGAAATGAACAAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_21622.p1 GENE.R_Transcript_21622~~R_Transcript_21622.p1 ORF type:5prime_partial len:187 (+),score=65.32 R_Transcript_21622:2-562(+)
RPTGEQDNRGKVQPAADRKTDGKPVPEPSMKETSKPGKRTDGKVAETSDSELRVENKVAVASQSDPQGDDEATVKPMIVTTKVLKNSENDQSKGSVDHAGPEKSIGSSVSSQSKHVDKLSASEPSTSAPAGLEENIVLGVALEGSKRTLPIEGEIDSPSTASETKEMAKHGSGNGSPAVDKDEMNK*

Click here to download the sequence:
Link to NCBI Protein BLAST