Transcript Information: R_Transcript_21624.p1


Annotated TAIR IDAT5G10490.1
Annotated Gene NameMSCS-like 2
Annotated Gene Symbol(s)MSL2
Annotation TypeOrtholog
Chromosome Positionchr5:3300376-3304005 | Reverse length=673
E-Value4.3E-191
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.008015523468
Replicate 25.9648580728119
Replicate 36.7678997443178
Condition 2: 8 Hour
Replicate 17.5822706796867
Replicate 28.0041792954244
Replicate 310.777518805855
Condition 3: 24 Hour
Replicate 18.609177710389
Replicate 27.9574371565435
Replicate 39.0162419875003


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_21624.p1 GENE.R_Transcript_21624~~R_Transcript_21624.p1 ORF type:internal len:352 (+),score=71.83,MS_channel|PF00924.14|9.6e-29 R_Transcript_21624:1-1053(+)
AAGCAAAGTGTGATTCAACAAGCTCAGAAGTACTTCATGGAGACAAATGACCCCACTGATACAAGAAATATGGGTTTTCAATTTGCTGGGAAAGCTGTGTGTTCTGCAGTGTGGGTTGCTGCTGTGTCACTGTTCATGGAGCTGTTGGGTTTCTCAACCCAAAAATGGCTCACTGCTGGAGGTCTTGGAACAGTGTTGTTGACACTAGCTGGCCGTGAGATATTTACCAATTTCCTATCAAGTGCAATGATCCATACAACACGACCATTTGTGGTGAATGAATGGATTCAAGCAAAAATTGAAGGATATGAAGTGTCGGGTACTGTTGAGCATGTCGGCTGGTGGTCACCGACAATAATAAGAGGTGAAGACCGTGAAGCAGTTCACATTCCTAACCACAAGTTCACAGTGAATGTGGTGCGGAACCTTAGTCAGAAAACTCACTGGCGTATCAAGACCCATCTTGCAATCAGTCATTTAGATGTTAGTAAGATAAATAATATTGTTGCTGACATGCGCAAAGTCTTAGCCAAGAATCCTCAAGTTGAACAGCAAAAGCTTCATAGAAGAGTGTTTCTAGAAAATGTCAATCCTGAAAATCAAGCTCTTCTGATTTTGATTTCCTGTTTTGTGAAGACATCACATCACGAAGAATACTTGTGTGTCAAGGAAGCTATATTGTTGGATCTTCTACGAGTCATCAGTCATCACGGGGCGCGACTTGCCACTCCAATTCGTACTATTCAGAAGTTTCATAGCGATGCCGACTTGGAAAACATGCCATTTTCAGAGTCGATCTTCAATCGTGGTGGACCAGCATCAAGACGTCGAATGCTTTTGATCGAGCCTCCTTACAAGATAAACGGAGAAGATAAATCAAAAACTCAGGCTCGCACAGCGCGACCTACTGGAGAGCAAGACAACCGTGGCAAAGTACAGCCAGCAGCTGACCGCAAAACTGATGGTAAACCAGTGCCTGAGCCAAGTATGAAAGAGACCTCAAAGCCTGGCAAGAGGACAGATGGTAAAGTGGCAGAAACTTCAGATTCTGAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_21624.p1 GENE.R_Transcript_21624~~R_Transcript_21624.p1 ORF type:internal len:352 (+),score=71.83,MS_channel|PF00924.14|9.6e-29 R_Transcript_21624:1-1053(+)
KQSVIQQAQKYFMETNDPTDTRNMGFQFAGKAVCSAVWVAAVSLFMELLGFSTQKWLTAGGLGTVLLTLAGREIFTNFLSSAMIHTTRPFVVNEWIQAKIEGYEVSGTVEHVGWWSPTIIRGEDREAVHIPNHKFTVNVVRNLSQKTHWRIKTHLAISHLDVSKINNIVADMRKVLAKNPQVEQQKLHRRVFLENVNPENQALLILISCFVKTSHHEEYLCVKEAILLDLLRVISHHGARLATPIRTIQKFHSDADLENMPFSESIFNRGGPASRRRMLLIEPPYKINGEDKSKTQARTARPTGEQDNRGKVQPAADRKTDGKPVPEPSMKETSKPGKRTDGKVAETSDSE

Click here to download the sequence:
Link to NCBI Protein BLAST